| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2894 |
|---|
| Symbol | trrA |
|---|
| ID | 2853701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 2964271 |
|---|
| End bp | 2965500 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637514316 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_037218 |
|---|
| Protein GI | 49478014 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.00223441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTT CTATCGATAT ACAACACTTG TGTGATCTTG CACATAAAGC ATTTAATGCC
CCTGTACATA TTTTATCTGC AGACAGAAAG ATTTTATATC ATTCTACATC TGATAATGTT
TGTAGTCCTT TTTATTCTTC AAAAGAAGAA CATCTTAGTG ATATTTATCA AGAAAACGAT
CCCTTTAACT TGCCACTTTT CCGAAGTAAC AACTATCTTG AAAATTTTGT TCTAATTCAT
ATAGAAAATC ATGATGATAT TAAAGGGACT ATTATAATCG GTCCTACTAT ACATCCAAAA
GATTCAGATG ATATGATCAT AAAATTTCAG AAAGAATTTA AAGCAAATGA TAACATTCAA
GAAAGACTTG CCTATTATCA GTGTTTATCT GAGATTAAAA AAACTACATT AATTGATATG
GGAATTTTAT TACATTACAT GATTTTTAAT GAAAAGTTAG ATGTAGATAT TGTCTTGGAA
AAAAATAAAG TACTAGAGGA AATTCCTAAT AAAAATGTGA AACCTGATTT ATATATTTTA
AAACGTCGAC AAAACAAACC TAAAACGCAC AATATGGCAT TAGTAAATGA TTTCTTTTCG
ACTATTAAAG AAGGGAATAA AAAAAAGTTA ATACAGTATA TGTATGCGGT TTCGCAAGAA
GATGTTGAGC TTATGCTAAT AGAGGATCCG CTCAGGAATC AAAAAAACCT TGGAATTATT
GCGATTACCT TAGCCACTCG ATATGCAATA GAAGGAAACC TGCCACCAGA TATTGCTTTT
GCTCATAGTA TTTTATATAT ACAAACCCTG GAACAATTAG ATAATGTAGA ATCTGTAAAG
CGATTGTCAG GGGATGCTTT ACGTACTTTT GCAGATCGTG TGAAAGAATA CAATGCAAAA
AAGTATTCTT ACGCGGTTAC TACATGTATA AAACATATTA ATAAAAATGT TTACGATGGA
ATATCTCTGA ATGAACTTGC TAATCATTTA GAAATTACGC CTACTTATCT GTCTAAACTA
TTTAAAAAAG AAATGGGAAT TACTTTAAGC GAATATATTC AAAGGGAACG AGTGGAAGAA
GCAAAGAAAT TATTAACACT CACTACTTAT TCGTTATCAG ATATCTGTGC GTGGCTTAAC
TTTAATGACC AAAGTTATTT TATAAGAGTT TTCAAAAAAA ACACTAGCAT GACTCCTAGG
CAGTACCGTG AAAAATATAC AGTAATATAA
|
|---|
| Protein sequence | MNTSIDIQHL CDLAHKAFNA PVHILSADRK ILYHSTSDNV CSPFYSSKEE HLSDIYQEND
PFNLPLFRSN NYLENFVLIH IENHDDIKGT IIIGPTIHPK DSDDMIIKFQ KEFKANDNIQ
ERLAYYQCLS EIKKTTLIDM GILLHYMIFN EKLDVDIVLE KNKVLEEIPN KNVKPDLYIL
KRRQNKPKTH NMALVNDFFS TIKEGNKKKL IQYMYAVSQE DVELMLIEDP LRNQKNLGII
AITLATRYAI EGNLPPDIAF AHSILYIQTL EQLDNVESVK RLSGDALRTF ADRVKEYNAK
KYSYAVTTCI KHINKNVYDG ISLNELANHL EITPTYLSKL FKKEMGITLS EYIQRERVEE
AKKLLTLTTY SLSDICAWLN FNDQSYFIRV FKKNTSMTPR QYREKYTVI
|
|---|
| |