Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_1763 |
Symbol | ldh |
ID | 2855355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 1850123 |
End bp | 1851067 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637513193 |
Product | L-lactate dehydrogenase |
Protein accession | YP_036095 |
Protein GI | 49481168 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.00307694 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG GGATTAACCG TGTTGTATTA GTAGGAACAG GAGCAGTTGG ATGTAGTTAT GCTTACTGCA TGATTAACCA AGCTGTAGCT GAAGAATTTG TTTTAGTTGA TGTAAACGAA GCAAAAGCTG AAGGAGAAGC AATGGATTTA AGTCATGCCG TTCCATTTGC TCCAGCTCCA ACTAGAGTAT GGAAAGGTAG CTACGAAGAT TGTAAAGATG CTGACCTTGT AGTCATTACG GCTGGATTAC CACAAAAGCC AGGCGAAACA CGTTTAGATT TAGTTGAGAA AAATGCAAAA ATCTTTAAAC AAATCGTGCG CAGTATTATG GATAGCGGAT TTGATGGTAT CTTCTTAATC GCAACTAACC CTGTCGATAT TTTAACTTAC GTAACTTGGA AAGAATCTGG TTTACCGAAA GAACGCGTAA TTGGTTCTGG CACAACACTT GATTCTGCTC GTTTCCGCTA TATGTTAGGT GAGTACTTCA ATATTGGTCC ACACAACATT CATGCTTATA TTATCGGAGA ACATGGTGAT ACGGAACTTC CTGTTTGGAG TCACGTATCA GTTGGTATTC AAAAACTACA AACACTGCTT GAAAAAGACA ATACGTATAA TCAAGAAGAT TTAGACAAAA TCTTCATAAA CGTTCGTGAT GCAGCTTACC ATATTATTGA ACGAAAAGGC GCAACATACT ATGGTATCGG TATGTCACTT CTACGCGTTA CTAAGGCAAT TTTAAACGAC GAAAATAGTG TATTAACTGT TTCGGCATAT TTAGAAGGTC AATACGGTCA AAAAGATGTG TATATCGGTG TACCTGCTGT TTTAAATCGC GGCGGTGTTC GTGAAATTTT AGAAGTAGAA TTAAGTGAAG ACGAAGAATT AAAATTCGAT CACTCAGTTC AAGTGTTGAA AGAAACAATG GCTCCTGTTC TTTAA
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Protein sequence | MKKGINRVVL VGTGAVGCSY AYCMINQAVA EEFVLVDVNE AKAEGEAMDL SHAVPFAPAP TRVWKGSYED CKDADLVVIT AGLPQKPGET RLDLVEKNAK IFKQIVRSIM DSGFDGIFLI ATNPVDILTY VTWKESGLPK ERVIGSGTTL DSARFRYMLG EYFNIGPHNI HAYIIGEHGD TELPVWSHVS VGIQKLQTLL EKDNTYNQED LDKIFINVRD AAYHIIERKG ATYYGIGMSL LRVTKAILND ENSVLTVSAY LEGQYGQKDV YIGVPAVLNR GGVREILEVE LSEDEELKFD HSVQVLKETM APVL
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