Gene BT9727_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_1178 
SymbolpotB 
ID2856574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp1268127 
End bp1268975 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content37% 
IMG OID637512611 
Productspermidine/putrescine ABC transporter, permease 
Protein accessionYP_035513 
Protein GI49477177 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAG GGAAATTACT CGCACTACCT ACAGTCGCAT GGCTGTTAAT CTTCTTCCTA 
ATTCCCCTTC TGTTTGTATT GGCATTTGCC TTCATGCAGC GCGGGGCGTA TGGAACAGTG
GAAATGCAAT TTACATTAGA AAACATAGCA CGAGTATTTG ACCCATTATA TATGGGGACG
TTATGGGAAA CAGTGAAAAT TGCGGTTATT ACTACAGTAA TATGTTTACT GATCGGTTAT
CCATTTGCAT ATACAATTAC AATTGTTGAT CGCAAATATC GTTCCATTCT TTTATTATTG
GCAACGATCC CGTTTTGGAT TAACTTCCTT GTTCGTTCAT ACGCATGGAT TGTTATTTTA
CGTTCACAAG GTCTTGTGAA CACGTTTTTA TTAAAGCTCG GTATTATTAG TGAACCTCTA
AATTTACTAT ATAATACACC TTCTGTAATA CTCGGAATGG TATATTCTTT ATTACCATTT
ATGATTTTAC CAGTGTATGC AGCGATTGAG CAGCTTGATA AGCGTAAGCT AGAAGCAGCT
TATGATTTAG GGGCAACACC AGTAAAGGCA TTTTGGAATG TTACAGTACC AATGACGATG
TCAGGGATTG CTACTGGTTC TATTTTAGTG TTTGTTTCTT CTATCGGAAT GTTTGTTGTA
TCAGACGTTA TGGGTGGATC GAAAGTAGCA TTAATCGGAA ACGTAATTCA AAATCAATTC
TTAGGAGCGC GTGATTGGCC GTTTGGATCT GCGTTATCTA TGATTGTTGT TCTATTTTCT
GTTCTGTTAA TTTACTTATA TTATCGTGCA ACGAAAGTAT ATAAATATGA TGGGAACGGA
GGGGAATAG
 
Protein sequence
MKKGKLLALP TVAWLLIFFL IPLLFVLAFA FMQRGAYGTV EMQFTLENIA RVFDPLYMGT 
LWETVKIAVI TTVICLLIGY PFAYTITIVD RKYRSILLLL ATIPFWINFL VRSYAWIVIL
RSQGLVNTFL LKLGIISEPL NLLYNTPSVI LGMVYSLLPF MILPVYAAIE QLDKRKLEAA
YDLGATPVKA FWNVTVPMTM SGIATGSILV FVSSIGMFVV SDVMGGSKVA LIGNVIQNQF
LGARDWPFGS ALSMIVVLFS VLLIYLYYRA TKVYKYDGNG GE