Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_1085 |
Symbol | oppC |
ID | 2858010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 1179602 |
End bp | 1180618 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637512519 |
Product | oligopeptide ABC transporter, permease |
Protein accession | YP_035422 |
Protein GI | 49477120 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAG ATGTACAAAA ATTATCTCCA GATTTATTTC AACAAGCCAA TCAAAATAAT GTGGATAATG AAGTCATTGC CCGTCCAAGC TTAACGTTTT GGCAAGATGT AAGAAGACGT TTGTTCCAAC ATAAAGGAGC AATGTTCGGT TTCGTTTTAT TAACGCTTAT TATCTTACTA GCAATTTTAG GACCGATGGT AAGTAAGCAC TCGTATAAAG AGCAAGATTT AGGACGTGCG AAATTACCAC CGAAAATTCC AGTTATTGAA AATGTTCATT GGTTACCATT TGATGGTACT GATCAATATG GTGTTGACCA ATATGAAAAA CGTGATATTA AAGAGTATTT CTGGTTTGGT ACAGATGATC TTGGCCGCGA TTTATGGACA AGAACATGGG AAGGTACGCG CGTATCATTA TATATCGCTC TTTTAGCAGC AGCAATTGAC TTAGTAATTG GGGTTGCATA TGGAGGTATT TCAGCATTCT ATGGCGGTAG AGTAGATAAC ATTATGCAAC GTATTATGGA GATTATTAAC GGTATTCCAT ACTTAATCAT CGTTATTTTA ATGGTAATCA TTATGGGATC TGGTATATGG TCAATTACAC TCGCAATGGC AATTACAGGT TGGATAGGGA TGTCGCGTAT CGTTCGTGGA CAAATCCTAA AATTAAAAAA TCAAGAATAC GTATTAGCAT CTCGTACATT AGGTGCAACA AATACACAAT TAATTGTAAA ACACTTAATC CCGAACGTAA TGGGACCAAT TATCGTAATG ACAATGTTTA CAATCCCAAC AGCGGTGTTT GGTGAGGCGT TCTTAAGCTT CATCGGTTTA GGTATTCAGC CACCATTCGC GTCACTTGGT TCTCTTGTAA ATGACGGTTA TAAATCAATT CAAACGTATC CGCATATGAT GTTCATCCCT GCGGTTGTTA TCAGTATATT AATCTTAGCG TTTAACTTAA TGGCAGACGG ATTACGCGAC GCGTTAGATC CAAAAATGCG TAAGTAA
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Protein sequence | MMKDVQKLSP DLFQQANQNN VDNEVIARPS LTFWQDVRRR LFQHKGAMFG FVLLTLIILL AILGPMVSKH SYKEQDLGRA KLPPKIPVIE NVHWLPFDGT DQYGVDQYEK RDIKEYFWFG TDDLGRDLWT RTWEGTRVSL YIALLAAAID LVIGVAYGGI SAFYGGRVDN IMQRIMEIIN GIPYLIIVIL MVIIMGSGIW SITLAMAITG WIGMSRIVRG QILKLKNQEY VLASRTLGAT NTQLIVKHLI PNVMGPIIVM TMFTIPTAVF GEAFLSFIGL GIQPPFASLG SLVNDGYKSI QTYPHMMFIP AVVISILILA FNLMADGLRD ALDPKMRK
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