Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_0913 |
Symbol | sigB |
ID | 2857548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 1009871 |
End bp | 1010647 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637512349 |
Product | RNA polymerase sigma factor SigB |
Protein accession | YP_035252 |
Protein GI | 49480184 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02941] RNA polymerase sigma-B factor [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0000335438 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAA TCCAATCTCA ACCTACGAAT CTTACTAAAG AAGACGTTAT TAAACTAATT GCAGAATTTC AACAAAACCA ATGTGATGAA GCACAGGAAA GGTTAGTTGA TCATTATAAA AATCTTGTCT ATTCCATTGC ATATCGCTAT TCAAAAGGCG GGCCGATGCA TGAGGATATT ATACAAGTAG GCATGTTAGG GCTCTTAGGC GCAATAAGAA GGTATGATTA TTCGATAGGG AATGCTTTTG AGCCTTTTGC AATACCTACG ATAGTAGGGG AAATAAAGAA GTATTTACGC GATAAAACTT GGGGCATTCA CGTTCCAAGG CGAATTAAAG ATTTAGGCGG AAAAATTAAA CTTGCGATAG AGGAACTAAC AGATCATTTG CAACGTTCAC CGAAGATTAT AGAGATTGCG GATCATTTAG GGCTATCCGA AGAGGAAGTG CTAGAAATTA TGGATGCGAA AAATAATTAT CGAGTATCTT CCTTAGATGA TGTAGTTGAA AATGCATCTG ATGGTAGTTC GGTAGCGAGA ATTGAATCTG TAGGTGAAGT AGAGCAAGGA TATGAAGAGA CAGAAAGGCG TCTCGTTTTA AAGGATATTT TTAACGTATT AAATGAAACG GAAAAGAGTG TTATTCATTA TATATTTGAA GAAAATTTAA ATCAAAAAGA TACAGGGGAA CGGTTAGGTA TTTCACAAAT GCACGTTTCT CGTATTAAAA GACAAGCGAT AAGTAAGTTG AAACAAGCCG CATTTTTAGA TACATAA
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Protein sequence | MMEIQSQPTN LTKEDVIKLI AEFQQNQCDE AQERLVDHYK NLVYSIAYRY SKGGPMHEDI IQVGMLGLLG AIRRYDYSIG NAFEPFAIPT IVGEIKKYLR DKTWGIHVPR RIKDLGGKIK LAIEELTDHL QRSPKIIEIA DHLGLSEEEV LEIMDAKNNY RVSSLDDVVE NASDGSSVAR IESVGEVEQG YEETERRLVL KDIFNVLNET EKSVIHYIFE ENLNQKDTGE RLGISQMHVS RIKRQAISKL KQAAFLDT
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