Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_0824 |
Symbol | oppC |
ID | 2856748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 925792 |
End bp | 926643 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637512263 |
Product | oligopeptide ABC transporter, permease |
Protein accession | YP_035167 |
Protein GI | 49479827 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAATA GGAGATTTCA AACGATAAAA AGTAGTTTTA CGAAAAATAA GTTTGTACTA ATGGGAGTTA TAATACTTGC GATTTTAACG GTTGCATCAA TATTCGCATT CGTATCGCCG TACGATCCTA GCAAAATGTC GATTCCAGAT CGCTTACAAG AACCGAGTAT GAGTCATCCT TTCGGAACGG ATGATTACGG AAGAGATTAC TTAACGAGAG CGTTATATGG CGGACGAGTT TCGCTTGCGG TCGGTTTCCT TGCGATGGTT GTTTCTATTA CAATCGGTAC TGCAGTTGGA ACAATTAGCG GGTATTTTGG CGGAAAGTTA GACAACTTTT TAATGAGAGT TGTTGAAGTG CTTATGTCAA TTCCATCATT CTTTTTAATG CTACTATTAA ATGCGTATTT AAAACCAGGA ATTACGACGT TAGTTCTTAT TATCGGATTA CTAACATGGA TGGACACCGC CCGTATTGTA AGGGCAGAAA CGTTATCTGT AAAAGAGCGT GAGTACGTTT TATATGCAAA AGTGTCAGGA CAAAAATCAC TCACGATTAT TGTAAGACAT ATCATTCCTA ACATCTTATC AACCATTATT ATCGCCGCGA CATTAACAAT TGCGACATCG ATTTTAATGG AATCATCACT TAGTTTCTTA GGATTAGGTA TTAGAGAACC AGATTCTTCT TGGGGCAGCA TGCTAAACAA TGCGCAAGGA TATATTGGTG AAGCTTGGTA TTTAACACTC TTCCCAGGAT TCCTTATCCT TTTAACGGTA CTTAGTTTTA ACGTAATTGG TGAAGCATTG AAGAAAGCTT TCGCACCAAA AGGAGCCGGA CATGAAAACT AA
|
Protein sequence | MNNRRFQTIK SSFTKNKFVL MGVIILAILT VASIFAFVSP YDPSKMSIPD RLQEPSMSHP FGTDDYGRDY LTRALYGGRV SLAVGFLAMV VSITIGTAVG TISGYFGGKL DNFLMRVVEV LMSIPSFFLM LLLNAYLKPG ITTLVLIIGL LTWMDTARIV RAETLSVKER EYVLYAKVSG QKSLTIIVRH IIPNILSTII IAATLTIATS ILMESSLSFL GLGIREPDSS WGSMLNNAQG YIGEAWYLTL FPGFLILLTV LSFNVIGEAL KKAFAPKGAG HEN
|
| |