Gene BT9727_0558 details

Gene Information

• Locus tag: BT9727_0558
• Symbol: rpoD
• ID: 2856119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: +
• Start bp: 653735
• End bp: 654292
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637511977
• Product: RNA polymerase sigma factor
• Protein accession: YP_034904
• Protein GI: 49476853
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 8.52234e-22
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTA CAGACAACGA TTATGAAAAG ATGGAAGAGC TATATGAGTT GTACGAACAA 
AAAGTTTATT ATGTAGCTTA TTCTATTTTA AATAATATTC AACAGGCTGA AGATACGGTT 
CAAGAGACAT TTATTACTCT TTATAAAAAT TTGGAAAAGC TTCATAACTT GAATATTCAA 
GAGCTTAAAC GCTACATTTT GAGGGTCGCG AAAAACAAGG CGATTGATAG TTATCGGAAA 
AATAAACGAC ATGAAACATT TTTAGAAGAA TATGAAAGAG AATCAATAGA AGCGGTAGAT 
GAAAATATTG AAGAGTGGGA AAAACGGAAA ATGTCTGAAG TTCAAATTGA TACATTGCTA 
AAAGAGTTAA ATGAGTCTAA TAGACAGGTG TTTAAGTACA AAGTCTTCTA TAACTTAACG 
TATCAAGAAA TTTCAAGTGT CATGGGGATA ACGGAGGCTA ATGTTCGCAA GCAGTTTGAA 
CGCGCTCGAA AACGAGTCCA AAATATGATA GGAGGTATAC AACATGACGA ATTCAAAGAA 
CTCCAAAGAA ATATATGA 

 

Protein sequence

MKVTDNDYEK MEELYELYEQ KVYYVAYSIL NNIQQAEDTV QETFITLYKN LEKLHNLNIQ 
ELKRYILRVA KNKAIDSYRK NKRHETFLEE YERESIEAVD ENIEEWEKRK MSEVQIDTLL 
KELNESNRQV FKYKVFYNLT YQEISSVMGI TEANVRKQFE RARKRVQNMI GGIQHDEFKE 
LQRNI