Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_0555 |
Symbol | rocE |
ID | 2854270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 651287 |
End bp | 652708 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637511974 |
Product | amino acid ABC transporter permease |
Protein accession | YP_034901 |
Protein GI | 49480226 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0833] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000183711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAC CAACGAATGA GAAATTACAT CGTACGATGA AGAGTAGACA TTTATTTATG ATCGCACTAG GTGGTGTAAT CGGGACGGGC TTTTTCTTGG GTTCTGGTTA CACCATTAAT CAGGCTGGAC CAGGGGGAGC CATCCTTTCA TATTTAGTGG GCGGATTTAT TATGTATTTA ACAATGCTAT GCCTTGGAGA GTTAACGGTA GCAATGCCAG TTTCAGGATC TTTCCAAAAG TATGCGACGA AGTTTATTGG ACCAGGAACG GGCTTTATGA TCGGCTGGCT ATATTGGCTT GGTTGGGCAG TAACAGTAGG ACTAGAATTA ACGTCAATCG GTTTAATGAT GAAGAGATGG TTTCCGAATG TTGATGTTTG GGTATGGTGT CTCGTCTTCG GCGTTATTTT ATATGCGTCA AACGCAATTT CAGCGAAAAG TTATGCTGAA TTAGAATTTT GGTTCTCTAG TATTAAAGTA ATTACAATTC TTGCATTTGT TGTTCTTGGT GGTAGTGCAT TATTAGGGTT TATATCATAT GACGGAAAAG AAGCAGCACC TCTTTTCTCT AACTTTGTAA GCGAAGGCGG GTTATTCCCG AATGGACTAG CTGCCGTATT ACTTACAATG ATTACAGTTA ACTTCTCGTT CCAAGGGACA GAGTTAATCG GGATTGCAGC GGGAGAAAGT GAAAATCCAG AAAAAACAAT TCCGCGTGCC ATCCGTAATA CAGTATGGCG CATTATGTTA TTCTTCATTT TAACAATGAC GATTTTAGTA GGATTAATTT CTTGGAAAGA AGCAGGGGTA ATTGAAAGTC CATTTGTAGT TGTATTTGAT AAAATTGGTA TTCCATACGC AGCTGATATA ATGAACTTCG TTATTATTAC AGCGTTACTA TCTGTGGCGA ATTCAGGATT ATATGCGGCA ACTCGTATAC TATGGTCACT TGCAAATGAA GGAATGGCAC CAACATCTTT CCAGAAAGTA AATAAGCGTG GTATTCCAAT TACCGCATTA GTTGTAACGA TTGCTGTAGC TGGCCTTTCT TTATTCACAA GTTTCCTTGC AGAAGATACA GTATACATGT ACTTATTATC TATAGCTGGT TTATCAGCTG TTTCAAGTTG GATCATTATT GCTTTATCGC AACTGCGCTT TAGAAGTCAG TATATAAAAG GCGGAGGAAA GTTAGAGGAT TTAAAATATA GAACACCGCT ATATCCAATT GTTCCTATTT TAGCTTTAAT TACAAATAGT ATCGTTGTTA TTAGTTTAGC GTTTATTCCA GAACAACGAA TGGCGTTATA TTGTGGTATT CCATTTATCA TTTTCTGCTA CATATATTAT TATATAAATA AGAAACGGCA GAAACCGATG AAGGTGGAGA CAACAAATGA AACTAACAAT CAAACACGAT GA
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Protein sequence | MQQPTNEKLH RTMKSRHLFM IALGGVIGTG FFLGSGYTIN QAGPGGAILS YLVGGFIMYL TMLCLGELTV AMPVSGSFQK YATKFIGPGT GFMIGWLYWL GWAVTVGLEL TSIGLMMKRW FPNVDVWVWC LVFGVILYAS NAISAKSYAE LEFWFSSIKV ITILAFVVLG GSALLGFISY DGKEAAPLFS NFVSEGGLFP NGLAAVLLTM ITVNFSFQGT ELIGIAAGES ENPEKTIPRA IRNTVWRIML FFILTMTILV GLISWKEAGV IESPFVVVFD KIGIPYAADI MNFVIITALL SVANSGLYAA TRILWSLANE GMAPTSFQKV NKRGIPITAL VVTIAVAGLS LFTSFLAEDT VYMYLLSIAG LSAVSSWIII ALSQLRFRSQ YIKGGGKLED LKYRTPLYPI VPILALITNS IVVISLAFIP EQRMALYCGI PFIIFCYIYY YINKKRQKPM KVETTNETNN QTR
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