| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0402 |
|---|
| Symbol | |
|---|
| ID | 2855891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 469687 |
|---|
| End bp | 470469 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637511806 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_034752 |
|---|
| Protein GI | 49480107 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | [TIGR02884] delta-lactam-biosynthetic de-N-acetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 70 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA AATGGTTATA TATCGGTCTC ATTTTTTCAA TTATGATGGC ACTTGTTCCA
GTTTCTGCAC TAGCTTATAC AAATACTCCA CATAACTGGG GAATCCCGCG CCCTAAAAAT
GAAACAGTAC CAGATGCAGG AAAGCTATAT ACAGATTTAC TACAAAAAAA TGGTGGGTTT
TATTTAGGAG ATACGAAGAA AAAGGATATT TATTTAACAT TTGATAATGG ATATGAGAAT
GGATACACAG GGAAAATCTT AGACGTATTA AAAGAGAAAA AAGTGCCAGC AACTTTCTTT
GTAACGGGGC ATTATATTAA AACACAAAAA GATTTATTGC TAAGAATGAA AGATGAAGGA
CACATTATTG GAAACCATTC GTGGAGTCAC CCTGATTTCA CAGCGGTAAA TGATGAGAAA
CTTCGTGAAG AATTAACGAG TGTAACGGAA GAAATTAAAA AAGTAACTGG GCAAAAAGAA
GTGAAATATG TACGTCCTCC GCGCGGCGTA TTTAGTGAAA GAACGTTAGC TCTTACGAAA
GAAATGGGCT ATTATAATGT ATTTTGGTCA CTTGCATTTT TGGATTGGAA AGTAGATGAG
CAAAGAGGAT GGCAATATGC GCATAATAAT GTTATGACGA TGATTCATCC AGGATCTATT
TTATTACTTC ATGCAATATC AAAAGATAAT GCAGAAGCAC TTGCAAAAAT CATTGATGAT
TTGCGCGAGA AAGGGTATCA TTTTAAAAGT CTAGATGACT TAGTAAAAAG CAATCAACCG
TAA
|
|---|
| Protein sequence | MKHKWLYIGL IFSIMMALVP VSALAYTNTP HNWGIPRPKN ETVPDAGKLY TDLLQKNGGF
YLGDTKKKDI YLTFDNGYEN GYTGKILDVL KEKKVPATFF VTGHYIKTQK DLLLRMKDEG
HIIGNHSWSH PDFTAVNDEK LREELTSVTE EIKKVTGQKE VKYVRPPRGV FSERTLALTK
EMGYYNVFWS LAFLDWKVDE QRGWQYAHNN VMTMIHPGSI LLLHAISKDN AEALAKIIDD
LREKGYHFKS LDDLVKSNQP
|
|---|
| |