| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA0786 |
|---|
| Symbol | |
|---|
| ID | 1165228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 767450 |
|---|
| End bp | 769063 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637331883 |
|---|
| Product | peptide ABC transporter, periplasmic peptide-binding protein, putative |
|---|
| Protein accession | NP_699960 |
|---|
| Protein GI | 23500520 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.527095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGGT TTGTTGCGTC GCGCAGGGCG TTTCTCGTTG GCTCGACCTC TCTGGCGGCG
CTCGCATTCT GGCCAAAAGC TACATGGGCA GCGCAAGAAG TGCAGAAGGG TGGGCGGCTG
GTTGTGGCAG CGGATTCCGA GCCACGCAAT CTGAACCCGG CCATTATCGC TTCCAACGGC
GTATTTTTTG TGGCGAGCAA GGTGATCGAG CCTCTGGCGG AGGCTGCCTA TGAAGGGCAA
GGCGGTCTTG CGCCGCGTCT TGCCACAAGC TGGGAAGGCT CTGCCGACGG CCTTACAGCC
ACTTTTCGCT TGCGTGAAGG CGTCAACTGG CACGATGGCA AGCCGTTTAC TTCAGCCGAT
GTCGCCTTTT CCGCGATGGA AGTCTGGAAG CCACTGCAAA ACCTTGGCCG TGTCGTGTTC
AAATCGCTGG AAAAGGTCGA GACGCCGGAC GAACATACCG CAATCTTCCA TTTTTCCGAG
CCAACGCCAT TTCAGCTCAT CCGCAATGCG CTGCCTGCGC TGACCGCCGT TTTGCCAAAG
CATGTCTTTG CCGGCACCGA TATTGCCGCC AATCCGGCAA ACGAAAAGCT CGTCGGCACG
GGGCCGTTCA AATATGCAGA ACACAAGACG GGCGAATATT ATCGGCTGGT GAAAAATGCG
GACTATTGGG GCGAGGGTGA GCCCTATCTG GATGAAGTAA TCTACCGTGT GCTGCCGGAT
CGTGCGGCCG CGGCTGATGC GCTGGAAGCC GGGGAGATCG ATCTTGCAGC TTTTTCCGCA
GTGCCGCTTG CCGATCTCGA CCGTATATCG AAAGTGCCGG GCCTTGCCGT TATTTCCAAA
GGCTATGAAG GGCTGACCTA TCAGCTTGTG GTGGAAATCA ATCACCGTCG CAAGGAACTG
GCAGACCTGA AGGTACGCCA GGCAATCGCC CATGCCATCG ACCGCGATTT CGCGGTGAAG
ACGATTTTCC AGGGGTTTGC CGTGCCCTCG ACCGGGCCGG TGCCGCGCTA TGACGGCCAG
TTCTATACGG ATGATGTGCC GACCTATCCC TTTGATGTGA AAAAGGCGAA CGCACTTTTG
GATGAAGCGG GCTACAGGCG CGGCAAGGAC GGAATGCGCT TTGCGCTCAA GCTTCTGCCT
GCACCCTATT TCAACGAGAC GAAGCAGTTC GGTGATTATC TGCGGCAGGC GCTTGCCGCC
ATCGGTATCG ATGCGCACAT CGTCAACAAT GATGCCGCCG CGCATCAGAA GGCAGTCTAT
ACGGATCACG ATTTCGACCT CGCCATCGCG CCGACCGTCT ATCGCGGCGA TCCGGCCATT
TCGACCACCA TTCTGGTGGA AAGCGGCATT CCGGCGGGTG TTCCTTTCTC CAATCAGGGC
GGCTATGCCA ATGCCGAACT CGATGCATTG ATTGCCAAAG CCGCAAGCAC GACCGATGAA
AAGGAACGCA CCGCGCTCTA CCAAAAATTC CAGCAGATGG TGGAAGCAGA CCTGCCGCTC
ATCAATGTCG CGGAATGGGG GTTCATTACG GTTGCCAGCG AGCGCGTGAA AAATGTTTCC
AACAATCCGC GCTGGGCGGT TTCCAACTGG GCTGACACAT GGCTGGAACC ATGA
|
|---|
| Protein sequence | MSGFVASRRA FLVGSTSLAA LAFWPKATWA AQEVQKGGRL VVAADSEPRN LNPAIIASNG
VFFVASKVIE PLAEAAYEGQ GGLAPRLATS WEGSADGLTA TFRLREGVNW HDGKPFTSAD
VAFSAMEVWK PLQNLGRVVF KSLEKVETPD EHTAIFHFSE PTPFQLIRNA LPALTAVLPK
HVFAGTDIAA NPANEKLVGT GPFKYAEHKT GEYYRLVKNA DYWGEGEPYL DEVIYRVLPD
RAAAADALEA GEIDLAAFSA VPLADLDRIS KVPGLAVISK GYEGLTYQLV VEINHRRKEL
ADLKVRQAIA HAIDRDFAVK TIFQGFAVPS TGPVPRYDGQ FYTDDVPTYP FDVKKANALL
DEAGYRRGKD GMRFALKLLP APYFNETKQF GDYLRQALAA IGIDAHIVNN DAAAHQKAVY
TDHDFDLAIA PTVYRGDPAI STTILVESGI PAGVPFSNQG GYANAELDAL IAKAASTTDE
KERTALYQKF QQMVEADLPL INVAEWGFIT VASERVKNVS NNPRWAVSNW ADTWLEP
|
|---|
| |