Gene BRA0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBRA0645 
SymbolpcaH 
ID1165087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrucella suis 1330 
KingdomBacteria 
Replicon accessionNC_004311 
Strand
Start bp626070 
End bp626810 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID637331752 
Productprotocatechuate 3,4-dioxygenase, beta subunit 
Protein accessionNP_699829 
Protein GI23500389 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.88521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACA GTCTGCCGGA AACGAGCCCG TTTTTCGCTC GCGATCTTTC CATGCACCCC 
CCGGCCTATA CGCCCTGGTA CAAGACGTCG GTTCTGCGTT CGCCCACCCG CGCGCTTATT
TCGCTGGAAG GCACCAGAAG CGAGATCACC GGCCCGGTTT TCGGCCATAA TATGCTGAAC
GAACTGGATA ATGACCTGAT CCTGAATTAT GCGCGCCCCG GCGAAATGCC GGTCGGCCCG
CGCATTCTGG TGCATGGGCG CGTGCTCGAT GAAGGCAACC GGCCGGTTCC CGGCGCATTG
CTGGAATTCT GGCAGGCCAA TGCGGGCGGG CGCTATCGCC ACAAGAAGGA AACCTATCTC
GCCGCCATCG ATCCGAATTT CGGCGGTGTG GGCCGAACCA TCACCGATGA AAACGGCTAT
TACTGGTTCA AGACCATCCA GCCCGGCGCT TATCCGTGGC CAAATGGCGT CAATGACTGG
CGCCCGGCGC ATATCCATTT TTCCGTCTTC GGCCACGGCT TTGCACAGCG CCTCATTACG
CAGATGTATT TCGAGGGCGA CCCGCTCATC TGGCGCTGCC CCATCGTGAA GACCATTCCC
GACAAATCAG CCATTGAGCG CCTCATCGCG CCGCTGGACA TGAACGCCAC CCTGCCGATG
GAAATGCGCG CCTTCAAGTT CGATATCGTA TTGCGCGGAC GCCGTTCGAC CTTCTTTGAA
AACCGCCCGG AGGGCAACTG A
 
Protein sequence
MKNSLPETSP FFARDLSMHP PAYTPWYKTS VLRSPTRALI SLEGTRSEIT GPVFGHNMLN 
ELDNDLILNY ARPGEMPVGP RILVHGRVLD EGNRPVPGAL LEFWQANAGG RYRHKKETYL
AAIDPNFGGV GRTITDENGY YWFKTIQPGA YPWPNGVNDW RPAHIHFSVF GHGFAQRLIT
QMYFEGDPLI WRCPIVKTIP DKSAIERLIA PLDMNATLPM EMRAFKFDIV LRGRRSTFFE
NRPEGN