Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BRA0645 |
Symbol | pcaH |
ID | 1165087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004311 |
Strand | + |
Start bp | 626070 |
End bp | 626810 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637331752 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | NP_699829 |
Protein GI | 23500389 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.88521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACA GTCTGCCGGA AACGAGCCCG TTTTTCGCTC GCGATCTTTC CATGCACCCC CCGGCCTATA CGCCCTGGTA CAAGACGTCG GTTCTGCGTT CGCCCACCCG CGCGCTTATT TCGCTGGAAG GCACCAGAAG CGAGATCACC GGCCCGGTTT TCGGCCATAA TATGCTGAAC GAACTGGATA ATGACCTGAT CCTGAATTAT GCGCGCCCCG GCGAAATGCC GGTCGGCCCG CGCATTCTGG TGCATGGGCG CGTGCTCGAT GAAGGCAACC GGCCGGTTCC CGGCGCATTG CTGGAATTCT GGCAGGCCAA TGCGGGCGGG CGCTATCGCC ACAAGAAGGA AACCTATCTC GCCGCCATCG ATCCGAATTT CGGCGGTGTG GGCCGAACCA TCACCGATGA AAACGGCTAT TACTGGTTCA AGACCATCCA GCCCGGCGCT TATCCGTGGC CAAATGGCGT CAATGACTGG CGCCCGGCGC ATATCCATTT TTCCGTCTTC GGCCACGGCT TTGCACAGCG CCTCATTACG CAGATGTATT TCGAGGGCGA CCCGCTCATC TGGCGCTGCC CCATCGTGAA GACCATTCCC GACAAATCAG CCATTGAGCG CCTCATCGCG CCGCTGGACA TGAACGCCAC CCTGCCGATG GAAATGCGCG CCTTCAAGTT CGATATCGTA TTGCGCGGAC GCCGTTCGAC CTTCTTTGAA AACCGCCCGG AGGGCAACTG A
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Protein sequence | MKNSLPETSP FFARDLSMHP PAYTPWYKTS VLRSPTRALI SLEGTRSEIT GPVFGHNMLN ELDNDLILNY ARPGEMPVGP RILVHGRVLD EGNRPVPGAL LEFWQANAGG RYRHKKETYL AAIDPNFGGV GRTITDENGY YWFKTIQPGA YPWPNGVNDW RPAHIHFSVF GHGFAQRLIT QMYFEGDPLI WRCPIVKTIP DKSAIERLIA PLDMNATLPM EMRAFKFDIV LRGRRSTFFE NRPEGN
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