Gene BRA0636 details

Gene Information

• Locus tag: BRA0636
• Symbol: pcaF
• ID: 1165078
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004311
• Strand: -
• Start bp: 617674
• End bp: 618876
• Gene Length: 1203 bp
• Protein Length: 400 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637331743
• Product: beta-ketoadipyl CoA thiolase
• Protein accession: NP_699820
• Protein GI: 23500380
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02430] beta-ketoadipyl CoA thiolase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAG CCTATATCTG CGACTATATC CGCACGCCGA TCGGCCGTTA CGGCGGCGCG 
CTTTCCTCCG TTCGCGCGGA TGATCTGGGT GCGGTGCCGC TGAAGGCGCT GATGGAGCGC 
AATGGCTCGG TCGATTGGGA AGCGGTGGAT GACGTGATCT TCGGTTCCGC CAATCAGGCA 
GGCGAAGACA ATCGCAATGT GGCACGCATG TCGCTGCTGC TGGCAGGCTT GCCGGTTGGC 
GTATCCGGCA CCACGATCAA CCGCCTCTGC GGTTCGGGCA TGGATGCCGT CATCACTGCT 
GCCCGCGCCA TCAAGGCAGG CGAGGCGGAA CTGATCGTGG CAGGCGGCGT GGAAAGCATG 
AGCCGCGCGC CCCTCGTCAT GCCGAAGGCT GACAGCGCCT TCTCCCGCAA GGCGGAAATC 
TACGACACAA CCATTGGCTG GCGCTTCATC AACCCCTTGA TGAAAAAGCA GTATGGTGTT 
GATTCCATGC CGGAAACGGG CGAAAACGTT GCCGAGGACT ACAATATCTC GCGAGAGGAT 
CAGGATGCTT TCGCCTTGCG CAGCCAGGAT AAGGCCGCTG CCGCGCAGGC CAATGGGCGT 
CTGGCCAGGG AAATCGTTTC CGTCACCATT CCGCAGCGCA AGGGCGATCC GGTAATCGTC 
GAGAAGGATG AACATCCGCG CGCAACCAGC CGGGAAGCTT TGGCAAAACT GCCGACGCCG 
TTCCGGCAGG GCGGCACGGT CACGGCTGGC AATGCATCCG GTGTCAATGA CGGTGCGGCC 
GCACTTGTCA TCGCTTCGGA AGCGGCGATC AGGAAATATG GTCTGAAACC CATTGCGCGC 
ATTATTGGCG GTGCGGCCGC TGGCGTCCCG CCACGCGTCA TGGGTATCGG TCCTGCGCCG 
GCCACCAGGA AGCTTTGCGC CCGCATCGGG ATCGCGCCGG ATGCTTTTGA TGTGATCGAG 
TTGAACGAAG CCTTTGCTTC TCAGGGGCTT GCTGTCCTGC GCCAGCTTGG CATCGCCGAT 
GACGACAAGC GCGTCAACCC GAATGGCGGC GCGATTGCGC TTGGCCATCC GCTCGGCATG 
TCGGGTGCGC GCATTGCAGG CACGGCTGCA CTAGAACTGT CGCTTAACAA TGGCAAATAC 
GCGCTTGCAA CCATGTGCAT CGGTGTCGGG CAGGGCATTG CCATCGCGCT TGAACGTGCC 
TGA 

 

Protein sequence

MTEAYICDYI RTPIGRYGGA LSSVRADDLG AVPLKALMER NGSVDWEAVD DVIFGSANQA 
GEDNRNVARM SLLLAGLPVG VSGTTINRLC GSGMDAVITA ARAIKAGEAE LIVAGGVESM 
SRAPLVMPKA DSAFSRKAEI YDTTIGWRFI NPLMKKQYGV DSMPETGENV AEDYNISRED 
QDAFALRSQD KAAAAQANGR LAREIVSVTI PQRKGDPVIV EKDEHPRATS REALAKLPTP 
FRQGGTVTAG NASGVNDGAA ALVIASEAAI RKYGLKPIAR IIGGAAAGVP PRVMGIGPAP 
ATRKLCARIG IAPDAFDVIE LNEAFASQGL AVLRQLGIAD DDKRVNPNGG AIALGHPLGM 
SGARIAGTAA LELSLNNGKY ALATMCIGVG QGIAIALERA