| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1983 |
|---|
| Symbol | lysA |
|---|
| ID | 1167684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 1909579 |
|---|
| End bp | 1910844 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637330920 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | NP_698958 |
|---|
| Protein GI | 23502831 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCACT TTGAATATCG CAACGGCGTT CTCCACGCTG AAAATGTCAG CCTGCCCGAA
ATAGCCAAGG CCGTCGGCAC GCCTTTCTAT GTCTATTCGC GCGCAACCAT CGAGCGCCAT
TTTCGCGTGT TCCATGACGC CTTTGCCGAT ATGGACACGC TCGTCACCTA TGCGCTGAAG
GCGAATTCCA ACCAGGCTGT GCTGACGGCG CTGGCAAAGC TTGGCGCGGG CGCGGACACG
GTTTCGCAGG GCGAGATCCG CCGTGCGCTT GCCGCGGGCA TTCCGGCAAA CAGGATTGTA
TTTTCCGGCG TCGGCAAGAC CCCGCGCGAA ATGGATTTTG CGCTGGAAGC TGGCATTTAC
TGTTTCAACG TCGAATCCGA GCCGGAGCTG GAAATTCTTT CAGCCCGCGC CGTCGCCGCC
GGCAAGGTGG CGCCTGTCTC GCTGCGTATC AACCCGGATG TGGATGCGAA GACCCACGCG
AAAATCTCCA CCGGCAAGTC GGAGAACAAG TTCGGCATCC CGCGCGACAA GGCGCGCGCG
GCCTATGCCC GCGCGGCAAG CCTGCCCGGC CTCAACGTCG TCGGCATCGA CATGCACATC
GGAAGCCAGA TCATCGATCT TGAGCCTTTC GACAATGCTT TCGCGCTGAT GGCGGAACTG
GTGAAGGAAT TGCAGGCCGA TGGCCACAAT ATCCGCCATG TCGATGTGGG CGGCGGGCTG
GGCATTCCCT ACCGCACCGA CAACACGCCG CCGCCGCCAC CTGTTGCCTA TGCCCAAATA
GTGGCGAAAC ACATCAAGCC GCTCGGCCTC AAGACCGTGT TTGAGCCGGG CCGCCTGATC
GTCGGCAATG CCGGGCTTCT CGTGACGGAA GTAATTTTCG TGAAGGAAGG CGATGCGAAG
AATTTCGTGA TCGTGGACGC GGCGATGAAC GATCTCATCC GCCCGACGCT TTACGATGCC
TTTCACGATA TCAGGCCGGT CATTATGCCG AACGACAATG CCCCGCGCAT CCGCGCCGAT
TTCGTCGGTC CGGTCTGCGA GACGGGCGAC TATCTGGGCC TCGACCGCGA GGTGGCAAAG
CCCGCCCCCG GCGACCTGAT CGCCATCTGC ACCACCGGCG CTTATGGCGC GGTGCTTTCC
AGCACCTATA ACAGCCGCCT TCTCATTCCC GAAGTGCTGG TGGACGGCGA GCGTTACCAT
GTGGTTCGTC CGCGCCGCAC CTATGAGGAA CTGCTGGCGC TCGATTCCGT GCCGGACTGG
CTGTAA
|
|---|
| Protein sequence | MNHFEYRNGV LHAENVSLPE IAKAVGTPFY VYSRATIERH FRVFHDAFAD MDTLVTYALK
ANSNQAVLTA LAKLGAGADT VSQGEIRRAL AAGIPANRIV FSGVGKTPRE MDFALEAGIY
CFNVESEPEL EILSARAVAA GKVAPVSLRI NPDVDAKTHA KISTGKSENK FGIPRDKARA
AYARAASLPG LNVVGIDMHI GSQIIDLEPF DNAFALMAEL VKELQADGHN IRHVDVGGGL
GIPYRTDNTP PPPPVAYAQI VAKHIKPLGL KTVFEPGRLI VGNAGLLVTE VIFVKEGDAK
NFVIVDAAMN DLIRPTLYDA FHDIRPVIMP NDNAPRIRAD FVGPVCETGD YLGLDREVAK
PAPGDLIAIC TTGAYGAVLS STYNSRLLIP EVLVDGERYH VVRPRRTYEE LLALDSVPDW
L
|
|---|
| |