Gene BR1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBR1213 
SymbolsecY 
ID1166889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrucella suis 1330 
KingdomBacteria 
Replicon accessionNC_004310 
Strand
Start bp1189696 
End bp1191036 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content55% 
IMG OID637330153 
Productpreprotein translocase subunit SecY 
Protein accessionNP_698217 
Protein GI23502090 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGG CTGCTGAACA GCTAGTTTCC AATCTCAATT TTTCGGCTTT CTCGAAGGCA 
GAAGAACTCA AGAAGCGCAT CTGGTTCACG CTGGGTGCTT TGCTCGTATA CCGGTTCGGC
ACCTATATTC CGCTTCCCGG CATCAATCCT GACGCGCTTG CGCAGGCTTT CCAGCAGCAT
AGCCAGGGTG TGCTCGGACT TTTCAATATG TTTGCCGGTG GCGCCGTCGG TCGTATGGCC
ATCTTCGCGC TCGGCATCAT GCCCTATATT TCCGCCTCCA TTATCGTGCA GCTCATGACG
TCGGTTGTGC CGTCGCTTGA AGCGCTGAAG AAGGAAGGCG AGGCGGGCCG CAAGATCATC
AATCAGTATA CGCGTTATGG CACGGTGCTT CTGGCGCTTG TGCAGGCTTA TGCGATTTCG
GTTGGCTTGC AGTCCGGCAA CGGCATTGTC ACCAATCCCG GGCCTTTCTT CATCGTTTCG
TCGGTGATTA CGCTTGTCGG CGGCACGATG TTCCTGATGT GGCTCGGTGA ACAGATCACG
GCGCGCGGTA TCGGCAACGG TATTTCGCTG ATTATCTTCT CCGGTATTGT CGCCAACTTG
CCGCACGCCA TTTCCGGCAC GCTGGAACTG GGGCGTACCG GTGCACTCTC AACCGGCCTT
ATTCTGGGTG TTATCGTTCT TGCGGTTGCC CTGGTTGCGG TTATCGTGTT CGTTGAACGC
GCGCAGCGCC GCCTTCTGAT CCAGTATCCG AAGCGTCAGG TCGGCAATCG TATGTTCCAG
GGCGATACGT CGCACCTGCC GCTCAAGCTC AACACCGCCG GTGTCATTCC GCCGATCTTT
GCTTCGTCGC TGCTGCTTTT GCCGGCGACG GTAGCAGGCT TTGCCAATAC GACGGAAATG
CCAGCCTGGG CGACCACCGT TCTCAATGCG CTCGGCCATG GACAGCCGCT TTATATGCTG
TTCTACGCTG CATTGATGGC ATTTTTCTGC TTCTTCTATA CGGCCATTGT GTTCAATCCC
AAGGACACCG CTGACCAGCT CAAGAAGCAT TCCGGCTTTA TTCCGGGCAT TCGTCCGGGT
GAGCGTACGG CGGAATATAT AGACTATGTG TTGACGCGTA TCACAGTTGT CGGCGCCATC
TATATTGTGC TTGTCTGTCT CCTGCCGGAA TTCCTGATTT CCGCGACCGG TGTGCCATTC
TATCTTGGTG GTACCTCGCT GCTGATCGTT GTGAGCGTGA CGCTCGATAC GGTTGCGCAA
ATTCAGGGGC ATCTGATCGC CCATCAGTAT GAAGGGCTGA TCAAGAAGTC CAAACTCAGA
GGTGGGAAAC GTAATAGATG A
 
Protein sequence
MASAAEQLVS NLNFSAFSKA EELKKRIWFT LGALLVYRFG TYIPLPGINP DALAQAFQQH 
SQGVLGLFNM FAGGAVGRMA IFALGIMPYI SASIIVQLMT SVVPSLEALK KEGEAGRKII
NQYTRYGTVL LALVQAYAIS VGLQSGNGIV TNPGPFFIVS SVITLVGGTM FLMWLGEQIT
ARGIGNGISL IIFSGIVANL PHAISGTLEL GRTGALSTGL ILGVIVLAVA LVAVIVFVER
AQRRLLIQYP KRQVGNRMFQ GDTSHLPLKL NTAGVIPPIF ASSLLLLPAT VAGFANTTEM
PAWATTVLNA LGHGQPLYML FYAALMAFFC FFYTAIVFNP KDTADQLKKH SGFIPGIRPG
ERTAEYIDYV LTRITVVGAI YIVLVCLLPE FLISATGVPF YLGGTSLLIV VSVTLDTVAQ
IQGHLIAHQY EGLIKKSKLR GGKRNR