| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_1434 |
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| Symbol | rpoD |
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| ID | 5203578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brucella ovis ATCC 25840 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009505 |
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| Strand | - |
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| Start bp | 1439643 |
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| End bp | 1441661 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640578406 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001259363 |
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| Protein GI | 148559099 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.960837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGA AGGTTAAGGA AAACGAAGAA GCCGAAGTCG AGCGCGAAGG TGCTGCCGAC
GGTCCGCTTC TCGACCTTTC TGACGATGCT GTCAAGAAGA TGATCAAGCT TGCGAAGAAG
CGCGGCTACG TCACCATGGA CGAGTTGAAT GCCGTGCTTC CTTCCGAGGA AGTGACTTCC
GAGCAGATCG AAGACACCAT GTCGATGCTT TCCGATATGG GCATCAATGT CGTTGAAGAT
GACGAGCAGG ATAACGATCG CGAAGAAGGC AACGACGACG AGGCGGAAGA AGGCGGCGAT
CTGGTCGAAG CCGGCGGCAC GGCTGTTGCC ACCACCACGA CCAAGAAAGA GCCGACCGAC
CGCACGGACG ATCCGGTGCG CATGTATCTG CGCGAAATGG GTTCGGTCGA GCTTTTGTCG
CGCGAAGGCG AAATTGCCAT TGCAAAGCGC ATCGAGGCCG GGCGCGAAAC CATGATCGCC
GGGCTTTGTG AAAGCCCGCT GAGCTTCCAG GCGATCATCA TCTGGCGCGA CCAGCTCAAC
GAATCCAATA TTCTGCTGCG CGAAATCATC GATCTCGAAA CCACCTATGC CGGCCCCGAA
GCCAAGCAGG CTCCGGTGAT CGAACGCGTG GAAGAAGAAA AGCCGCGCGA TGAAAGGCCA
CAGCGCCGCT CGCGTGACGA CGACGACATT ACCAATGTCG GCGGCGATAT GCCGGTGGAA
GACGATGACG ACGATGAGGA TGAAGCCAAC CTGTCGCTGG CGGCCATGGA AGCCGAACTG
CGCCCGCAGG TCATGGAAAC GCTCGATTTC ATCGCCGATA CCTATAAGAA GCTGCGCAAG
TTGCAGGACC AGCAGGTCGA GGGCCGCCTG GCTGCAACGG GCGAGCTTTC CTCCAGCCAG
GAGCGCCGCT ACAAGGAGCT GAAAGACCAG CTTATCAAGG CTGTGAAGTC GCTTTCGCTC
AACCAGAACC GTATCGAGCA GCTTGTTGAG CAGCTTTACG ATATCAATAA GCGCCTGGTG
CAGAACGAAG GCAAGCTGCT GCGTCTGGCC GAATCCTTCG GCGTGCGTCG TGAAGACTTC
CTGAAGGAAT ATCAGGGCCA TGAGCTTGAC CCGAACTGGG TGGAGCGCGT TGCTACCTTG
CCAAGCCGTG GCTGGAAGGA ATTTGCCGCC AAGGAAGCCG ATTCCATTGG CCGTCTGCGT
AGCGAAATCC AGAATCTCGC AACCGAAACC GCTATTTCCA TCGGTGAATT CCGCCGTATC
GTCAATCAGG TCCAGAAGGG CGAACGCGAA GCGACCATCG CCAAGAAGGA AATGGTGGAA
GCGAACCTGC GCCTGGTGAT TTCGATTGCC AAGAAGTACA CGAACCGCGG CCTTCAGTTC
CTCGATCTCA TTCAGGAAGG CAATATTGGC CTCATGAAAG CGGTCGATAA GTTTGAATAT
CGCCGCGGCT ACAAGTTCTC GACCTATGCG ACCTGGTGGA TTCGTCAGGC AATTACCCGT
TCGATTGCCG ATCAGGCCCG CACGATCCGC ATTCCGGTGC ATATGATCGA AACGATCAAC
AAGATCGTTC GTACTTCGCG CCAGATGCTG CATGAAATCG GCCGTGAACC GACGCCGGAA
GAACTGGCGG AAAAGCTTAC CATGCCGCTC GAAAAAGTGC GCAAGGTGCT GAAAATCGCC
AAGGAACCGA TCTCCCTCGA AACGCCGGTC GGCGATGAGG AGGATTCACA CCTGGGCGAT
TTCATCGAGG ACAAGAACGC GCTTTTGCCG ATCGATGCTG CCATTCAGGC CAATCTGCGC
GATACGACGA CCCGCGTTCT CGCTTCGCTG ACGCCGCGTG AGGAACGTGT TCTTCGTATG
CGCTTCGGCA TTGGCATGAA CACTGACCAT ACGCTGGAAG AAGTTGGCCA GCAGTTCTCG
GTCACGCGTG AACGTATCCG CCAGATCGAG GCCAAGGCGC TGCGCAAGCT GAAGCATCCG
AGCCGTTCAC GCAAGCTGCG TTCGTTCCTT GATAGCTGA
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| Protein sequence | MATKVKENEE AEVEREGAAD GPLLDLSDDA VKKMIKLAKK RGYVTMDELN AVLPSEEVTS
EQIEDTMSML SDMGINVVED DEQDNDREEG NDDEAEEGGD LVEAGGTAVA TTTTKKEPTD
RTDDPVRMYL REMGSVELLS REGEIAIAKR IEAGRETMIA GLCESPLSFQ AIIIWRDQLN
ESNILLREII DLETTYAGPE AKQAPVIERV EEEKPRDERP QRRSRDDDDI TNVGGDMPVE
DDDDDEDEAN LSLAAMEAEL RPQVMETLDF IADTYKKLRK LQDQQVEGRL AATGELSSSQ
ERRYKELKDQ LIKAVKSLSL NQNRIEQLVE QLYDINKRLV QNEGKLLRLA ESFGVRREDF
LKEYQGHELD PNWVERVATL PSRGWKEFAA KEADSIGRLR SEIQNLATET AISIGEFRRI
VNQVQKGERE ATIAKKEMVE ANLRLVISIA KKYTNRGLQF LDLIQEGNIG LMKAVDKFEY
RRGYKFSTYA TWWIRQAITR SIADQARTIR IPVHMIETIN KIVRTSRQML HEIGREPTPE
ELAEKLTMPL EKVRKVLKIA KEPISLETPV GDEEDSHLGD FIEDKNALLP IDAAIQANLR
DTTTRVLASL TPREERVLRM RFGIGMNTDH TLEEVGQQFS VTRERIRQIE AKALRKLKHP
SRSRKLRSFL DS
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