| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3513 |
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| Symbol | gspH |
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| ID | 4680559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 3470294 |
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| End bp | 3470893 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639847766 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_994791 |
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| Protein GI | 121599551 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCTCGA TGTACGCACG ACCCGGCACG ATTTTCGTTT GCGATACGCG GCGTCACGCG
GGGGCCGCCC TCGGCGGGGC CGCGAAAGCG CGCGCCGGCG CGTGCGCGGG TGTCTCGTCC
GGGCGCCCGG CGGGCACCGC CTCGGCGCGC CGCGCGCGCG GCTTCACGCT GCTCGAAATG
CTCGTCGTGC TCGTGATCGC GGGCATCCTG GTGTCGGTCG CGTCGCTCAC GCTCAGGCGC
AACCCGCGCA CCGACCTGCG CGAGGAAGCG CAGCGCATCG CGCTGCTGTT CGAGACGGCG
GGCGACGAAG CGCAGGTGCG TGCGCGGCCG ATCGCGTGGC GCGCCACCGA GCATGGTTTC
CGTTTCGACA TCCGCACGGG CGACGGCTGG CGCCCACTGC GCGACGACGT GCTGCGCGCG
CGCGACTGGG ATGGCGGCGT GACGGGCGCG GCGATCGACT ATCCCGGCTC GGACACGCAC
ACGGACGCGG TCGTATTCGG CACCGAAAGC ATCGACGTGC CGGTGCGCGT CACGCTGTAT
TCGGCGGTCG GCAGCGCGAC GATCGTCGGC ACCGGCAACG GCCGCTACGA GGTGCGGTGA
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| Protein sequence | MFSMYARPGT IFVCDTRRHA GAALGGAAKA RAGACAGVSS GRPAGTASAR RARGFTLLEM
LVVLVIAGIL VSVASLTLRR NPRTDLREEA QRIALLFETA GDEAQVRARP IAWRATEHGF
RFDIRTGDGW RPLRDDVLRA RDWDGGVTGA AIDYPGSDTH TDAVVFGTES IDVPVRVTLY
SAVGSATIVG TGNGRYEVR
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