Gene BMASAVP1_A3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3462 
Symbol 
ID4679310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp3425831 
End bp3426454 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID639847715 
ProductLysE family translocator protein 
Protein accessionYP_994740 
Protein GI121598940 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.531352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTCG AAACCTGGCT CGCGTTCGCC GGCGCGAGCA TCGTGCTTCT GATGATTCCC 
GGCCCGACGA TCCTGCTCGT GATCGGCGAT TCGCTCGCGA ACCGCCATCG GTCGTCGTGG 
AGCACCGTCG CGGGCGTCGC GGCGGGCGAC ACCACCGCGA TGACGATCTC GCTCGCCGGC 
GCGGGCGCGC TGCTCGCGAT GTCGGCGGCC GCGTTCACCG CGCTCAAGCT TGTCGGCGGC 
GGCTATCTCG TCTATCTCGG CATCCGTTCG ATTCTGCATG CGCGCCGCAT CGGCGCGATG 
GACGTGCGCA TCGAGCGCCG TTCGGCGAAG CGGCGTTTCC TGTCCGCGTG GGCCGTCACC 
GCGCTCAATC CGAAGAGCAT CGTGCTCTTC GTCGCGTTCG TTCCGCAGTT CATCTCGCCG 
CACGAGACGT TCGCGCGGCA ATGCGCGATC CTGCTGCCGA CCTTCGTATG CCTCGCGGCG 
ATCAACGCGG CCTGCTATGC GCGCATCGCG CGTTTCGCCG CTGCGCGGCT GACGGGCGCC 
GCCGCGCAGC GGCGCTTCGG GTACGGCGGG GGCGCCGCGC TGATCGGCGC GGGCGCATTG 
ACGCTCGGAA TGTCGCGAAG CTGA
 
Protein sequence
MSVETWLAFA GASIVLLMIP GPTILLVIGD SLANRHRSSW STVAGVAAGD TTAMTISLAG 
AGALLAMSAA AFTALKLVGG GYLVYLGIRS ILHARRIGAM DVRIERRSAK RRFLSAWAVT 
ALNPKSIVLF VAFVPQFISP HETFARQCAI LLPTFVCLAA INAACYARIA RFAAARLTGA 
AAQRRFGYGG GAALIGAGAL TLGMSRS