| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3406 |
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| Symbol | |
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| ID | 4678617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 3371185 |
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| End bp | 3372393 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639847660 |
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| Product | putative amino acid ABC transporter, permease protein |
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| Protein accession | YP_994685 |
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| Protein GI | 121598754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.126603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGACC AGCCGCCCGA TCTCGCCTCG CCCGCCTCAG CCCATCGCCG GCTTCCCGCC
TCCGCCCGCC ACCGCGCGCG GGCGGCCACG ATGGCGCTTT TCTTCGTCGC CGGCATGATG
TACGCGTCAT GGGGCGTGCA CGTGCCGACG GTGCGCGACA AGTTCGCGCT GTCGCCCGCG
CTGCTGTCGT TCGCACTCCT CGCGGTCGCG ATCGGCTCGA TCGTCGCGAT GACGACCAAC
GCGCGCTGGA TCGCGCGCGT CGGATCGCGC ACCGCCTGCC TCGCCGGCGG CCTCGCGATG
TCCGCGAGCG GCGCGCTGAT CCTCGTCGTG CCGACCTACC CGCTGCTGCT CGCGGTGCTC
GCGCTGTTCG GCTTCTCGAT GGCGACGCTC GACGTGGCGG TGAACGCCGA GGCGAGCGCC
GTCGAATCGG CATTCGGCAA ACCGATCATG TCGATGCTGC ACGGCATGTT CAGCGTCGGC
GGGATGGCGG GCGCAGCGGC GGGCGGCGCG CTGCTGTCGG CCGGCATGGC GAGCGCCGTG
CATCTCGGGC TCGCCGCGCT CGCGAGCGCG CTCGTGCTCG CGCTTGCGTG CCCGGCCGTG
CTGCCGCATG TCCCGCACAC GGCCGCCGCG GACGGCGCCC CGCGCGTGAA CCGCTGGCGC
TCGCCCGCGC TGTGGGCGCT CGGCGCCATC GCGCTCGTCG CGTTGATCGC CGAAGGCGCG
ATGTACGACT GGGCGACTGT TTACATGCGC GACGTCGTCC TCGCGTCGCC GGCGTTCTCG
AGCGCCGCCT ATGCGGCGTT CTCGGGCGGC ATGGCCGCCG CGCGCTTCGC GGGCGATGCG
GTTCGCGCGC GCTTCGGCGC CCCGCAGCTC GTCTGCGCGA GCGCGACGCT CGCGTGCGTC
GGCATGATCG CCGCGCTCGC GCTGCCGTCC CCCTTCGTCG CGCTCGCGGG CTTCACGCTG
ATGGGCCTCG GCCTCGCCAA CATGATGCCC GTGCTGTTCG CCGCCGCCGC GCGGATCGAC
GGCATTCACG CGGCCGAAGG GCTCGCGCAC GTCGCGGGAC TCGCGTACTT CGGGCTGCTG
TTCGGTCCGG TCGCGATCGG CGCGGTCACG CAGGCGGCCA ACCTGTCGGT CGGGCTGTCG
ATCGTCGCTC TGTGCGCGGC GCTCGTCGCA ATCGTCGCGC CGAAGGTGCT GAGCCGGCTG
AAAATCTGA
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| Protein sequence | MSDQPPDLAS PASAHRRLPA SARHRARAAT MALFFVAGMM YASWGVHVPT VRDKFALSPA
LLSFALLAVA IGSIVAMTTN ARWIARVGSR TACLAGGLAM SASGALILVV PTYPLLLAVL
ALFGFSMATL DVAVNAEASA VESAFGKPIM SMLHGMFSVG GMAGAAAGGA LLSAGMASAV
HLGLAALASA LVLALACPAV LPHVPHTAAA DGAPRVNRWR SPALWALGAI ALVALIAEGA
MYDWATVYMR DVVLASPAFS SAAYAAFSGG MAAARFAGDA VRARFGAPQL VCASATLACV
GMIAALALPS PFVALAGFTL MGLGLANMMP VLFAAAARID GIHAAEGLAH VAGLAYFGLL
FGPVAIGAVT QAANLSVGLS IVALCAALVA IVAPKVLSRL KI
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