| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3396 |
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| Symbol | mnmC |
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| ID | 4679249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 3360490 |
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| End bp | 3362616 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639847650 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_994675 |
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| Protein GI | 121598865 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.145892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCCG CGCGGCTTTC GGGCCGCGCG AACCGGCTTC GCCGCGGCTT GGCCGAAGCC
CGCGCGCGGT TTCGTTGGAT TTTGCCAACG CCAGGCGGGA CGGGGCTCTC GCGGCGGTTC
GCCGCATTTT CGCCGCCTTC ATTTTTGTTT CGCATGACCG ATCGAATCGT TCCGGCGACG
CTCGTCTTCC GCGAGGACGG CACCGTCGTC TCGCCGCTCT ACGGCGACAT CTACCACAGC
GCGGCCGGCG CGCTCGCCCA GGCCGACCAC GTGTTCATCC GCGGCAACGG CCTGCCGGAA
CGTTGGCGGC ACGAGCGAGC TTTCACGATT ATCGAGACAG GATTCGGCAC GGGCTGCAAC
TTTCTCGCGA CATGGGCTGC ATGGCGTGCG GATCCGTCGC ACTGCGAGCG GCTTCACTTC
GTCTCGGTCG AAAAGCATCC GTTCGCGCGC GAAGATCTGC GGCGCGCGGC CGCGCATATC
GTTGCATATA CAACTATTAC GCCGATTGCG CCGCTCGTCG ACGAGCTCGC GAACGCATGG
CCCGCGCTGA CGCCGGGCGT GCATCGTCTC GAATTCGACG ACGGGCGCGT CACGCTCACG
CTCGTGTTCG GCGACGCGCT CGACGTGCTG CCGAACCTCG CGCTGCGCGC GCACGCGTTC
TATCTCGACG GCTTCGCGCC GTCGAAGAAC GCGGATTTGT GGTCGCCCGC GATCTTCAAA
TCGCTCGCGA AGCTTGCCGA CGAACGCGCG ACGTTCGCGA CCTACACGAG CTCCGGCGCC
GTCAAGCGCG CGCTCGACGA AGCGGGTTTC GCGTACCGAA AAGTCGACGG CTTCGCCGGC
AAGCGCGCCA TGCTCGTCGG CGAATTCGCG CCGCGCTGGC GCGTGCGCCG CCATGAGCCG
CCGCGTGCGT TCAGCACGGA TAGACGCGAC GCGATCGTGA TCGGCGCGGG CCTCGCCGGC
TGCGCGGTCG TCGAGCGGCT CGCCGCGCGC GGCTGGCACG TGACGCTGAT CGAGCGGCGC
GAGCGGATCG CGAGCGAGGC GTCGGGCAAC CCCGCCGGCG TATTCCATCC GATGATCGCG
CGCGACGATA ACCTCGCGGC CCGCCTGTCG CGCGCCGGCT TCCTGCACGC GCTGCATCGC
TGGCGCGCGC TCGAGCGCGC CGGGCATGCG TTCTCGCGCA GCACACATGG CCTCGTTCAG
CTTGCCACGT CGGACGATGA ATTCGAGCGG ATGCGCGAGA GCATCGACGC GCTCGGCGTG
CCGGCCGAGC TCGCCTCGGC GCTGTCGCGC GACGACGCGA GAGCGCTGTT GCGAACCGAC
GTCGCGCACG GCGGCTGGCT GTTTGCGCAG GGCGGCTCGA TCAGCCCCGC CACGCTCGCG
GCCGCTCAGT GCGCGGCCGC GGGCGACAGG CTTTCGCGCA TCGTCGGCGT CGAGATCGCG
CGGCTCGAAC GCGGCGGCGA CGGCCGCTGG CGCGCGCTCG ACGCATCGGG CGCGACGATT
GCGCAGGCGA GCGTCGTCGT CGTCGCGAAC GCGGCCGATG CGGCGCGCAT CGCGGGCCTG
CGGCATGCGC CGACGCAACG CGTGCGCGGC CAGTTGACGC TGCTGCCGCC GGGCAGCGCG
CCCGCCGTGC CGCTGCCCGT GATCGGCGAC GGCTACGTCG TGCCGCTCGC GAACGGCGTC
ACGCTGACGG GCGCAACCTA TGAACCGGAC GATACGGATG CGACACCGCG CGAAGCCGGC
CATCGCGAGA ACCTCGAGCG GCTCGAACGG CTGCTGCCAG CGTTTTCCGC GAACGCGCTC
GATGCGGGCG CGCTCGCGGG CCGCGTCGGC TTTCGCTGCG TCGCGAGCGA CCGGCTGCCG
CTCGTCGGCG AGCTCGGCGA CGAGGCGGCG GCCGCGCGCG AGGCGGCGGC GCTGACGGGC
GCACGGCTGC GCGACGTGCC GCGCGCGACG GGCCTCTACG GCGCCTTCGG TTACGGCTCG
CGCGGGCTCG TCTGGGCGGC GCTCGGCGCC GAGCTGATCG CCGCGCAGAT CGACGGCGAG
CCGTGGCCGC TCGAGCGCGA ACTCGCCGAA GCGATCGACC CGGCGCGCTT CCTCGTTCGC
GCGCTGCGGC ACGGCCGCGT CGCCTGA
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| Protein sequence | MRSARLSGRA NRLRRGLAEA RARFRWILPT PGGTGLSRRF AAFSPPSFLF RMTDRIVPAT
LVFREDGTVV SPLYGDIYHS AAGALAQADH VFIRGNGLPE RWRHERAFTI IETGFGTGCN
FLATWAAWRA DPSHCERLHF VSVEKHPFAR EDLRRAAAHI VAYTTITPIA PLVDELANAW
PALTPGVHRL EFDDGRVTLT LVFGDALDVL PNLALRAHAF YLDGFAPSKN ADLWSPAIFK
SLAKLADERA TFATYTSSGA VKRALDEAGF AYRKVDGFAG KRAMLVGEFA PRWRVRRHEP
PRAFSTDRRD AIVIGAGLAG CAVVERLAAR GWHVTLIERR ERIASEASGN PAGVFHPMIA
RDDNLAARLS RAGFLHALHR WRALERAGHA FSRSTHGLVQ LATSDDEFER MRESIDALGV
PAELASALSR DDARALLRTD VAHGGWLFAQ GGSISPATLA AAQCAAAGDR LSRIVGVEIA
RLERGGDGRW RALDASGATI AQASVVVVAN AADAARIAGL RHAPTQRVRG QLTLLPPGSA
PAVPLPVIGD GYVVPLANGV TLTGATYEPD DTDATPREAG HRENLERLER LLPAFSANAL
DAGALAGRVG FRCVASDRLP LVGELGDEAA AAREAAALTG ARLRDVPRAT GLYGAFGYGS
RGLVWAALGA ELIAAQIDGE PWPLERELAE AIDPARFLVR ALRHGRVA
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