Gene BMASAVP1_A3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3258 
SymbolpetC 
ID4679221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp3218665 
End bp3219423 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content60% 
IMG OID639847514 
Productubiquinol-cytochrome c reductase, cytochrome c1 
Protein accessionYP_994541 
Protein GI121600060 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TGCTTTCGAC GCTCGCAATG TTTATTGTGT CGGCATGTCT GCTGACGAGC 
GTGTCCGTGC GGGCCGAAGA GGGGAAATTT CCGCTCGATC GGGCACCCGA CAACACGGAG
AATCTCGTCT CCTTGCAGCA TGGCGCGCAA TTGTTTGTAA ACTATTGCCT GAATTGCCAT
AGTGCGAACC TGATGCGCTA CAACCGGCTG ACGGATCTCG GTATCTCGCA GAAGGAGATC
GAGAAGAATC TGCTGTTTGC GACCGACAAG GTCGGCAACA CGATGACCGT CGCGATGCGG
CCGGAAGACG CGAAGACCTG GCTCGGCGTT GCGCCGCCGG ATCTGTCCGT CGAAGCGCGC
GCTCGCAGCC GTGATTGGCT CTACACGTAT CTGCGCACTT TCTACCGCGA CGATACGCGC
CCGACGGGCT GGAACAACGC CGTGTTCCCG AACGTCGGCA TGCCTCACGT GCTGTGGCAG
CTTCAGGGAG AGCGCATTGC AAAATTCGAG GAAAAGACGG ACGAGGAAAC GGGCGAGAAA
ACGCACAAGC TCGTCGGGTT CCAGCAGGTG ACGCCCGGGA CGCTGGCGCC GGCGGATTAC
GACGCCGCGG TCGGCGATCT GGTCGCGTAC CTGAACTGGA TGTCCGAGCC GGCGCAACAG
ACCCGCAAGC GCCTCGGCGT ATGGGTGCTG CTGTTCCTTG GTGTCCTGAC GTTCCTCGCG
TGGCGGCTGA ATGCCGCCTA CTGGAAAGAT ATCAAGTAA
 
Protein sequence
MKKLLSTLAM FIVSACLLTS VSVRAEEGKF PLDRAPDNTE NLVSLQHGAQ LFVNYCLNCH 
SANLMRYNRL TDLGISQKEI EKNLLFATDK VGNTMTVAMR PEDAKTWLGV APPDLSVEAR
ARSRDWLYTY LRTFYRDDTR PTGWNNAVFP NVGMPHVLWQ LQGERIAKFE EKTDEETGEK
THKLVGFQQV TPGTLAPADY DAAVGDLVAY LNWMSEPAQQ TRKRLGVWVL LFLGVLTFLA
WRLNAAYWKD IK