Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3214 |
Symbol | |
ID | 4679027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 3179345 |
End bp | 3180076 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639847470 |
Product | OmpW family outer membrane protein |
Protein accession | YP_994497 |
Protein GI | 121598577 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA AAATGGCCAT TACGGGGGCC GTTGCGCTCG CTTTCGCGGC AGCCGCGACG GGTGCGCACG CGCAATCCGC AGGCAGCTTC TATGTGACGA CCGGCTGGTT CCATCTCGCC CCTCAGGACA GCAGCGATCC GCTGAAGATC ATGAACGTCG GCGGCTCGCC GGTGAATCAC GAGGTGCCCA ACACGGGCGC GGGCATCGAC AATGCGGACA CCATCGGCCT CGCCGCCGGC TACTTCCTGA CGGATCACAT CGCCACTGAA TTGGTCGCCG GGATCCCGCC AAGGTTCAAT CTGAACGGCA AAGGCTCGCT CGAGCAATTC GGCGTGCTCG GTCATGCTTA TCAATGGAGC CCGGCGCTCC TCCTCAAGTA TTACTTCAAC GACGCGAAGG CGAAATTCCG GCCCTACGTC GGCATCGGCG CCTCGTATAT CTGGTTCACC GGCGCGAAGA TCACGAACAC CGCATTCGAG CGCGGCGCGC TCGGCGGGCC GACCAGCGTG CAGACCAGCA ATCAGTGGGC GCCCGTCCTC AACGCGGGCT TCACGTACAA CTTCACCGAT CACTGGTTCG GCGGGCTGTC GGTGTCGTAC ATCCCCGTCA GCCTGACGGC CACGCTGACG ACGCAGCGCC CGACGCCGAT CGGCAACGTC ACGCAGACCT CGCAAGCGAA GATCACGCTG AATCCGATCG TGACCTACCT GAACATCGGC TACCGTTTCT AA
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Protein sequence | MKQKMAITGA VALAFAAAAT GAHAQSAGSF YVTTGWFHLA PQDSSDPLKI MNVGGSPVNH EVPNTGAGID NADTIGLAAG YFLTDHIATE LVAGIPPRFN LNGKGSLEQF GVLGHAYQWS PALLLKYYFN DAKAKFRPYV GIGASYIWFT GAKITNTAFE RGALGGPTSV QTSNQWAPVL NAGFTYNFTD HWFGGLSVSY IPVSLTATLT TQRPTPIGNV TQTSQAKITL NPIVTYLNIG YRF
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