Gene BMASAVP1_A3168 details

Gene Information

• Locus tag: BMASAVP1_A3168
• Symbol: rplD
• ID: 4680074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: -
• Start bp: 3132758
• End bp: 3133378
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639847424
• Product: 50S ribosomal protein L4
• Protein accession: YP_994455
• Protein GI: 121599603
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000000473803
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTCA AGCTCCTGAA TTCGAATGGT CAGGAAGGTG CGGTGGTCAA CGCGTCGGAC 
GTCGTGTTCG GCCGTGACTA CAACGAAGCG CTGATCCACC AGGTCGTCGT CGCTTATCAG 
GCGAACGCCC GCCAGGGCAA TCGCGCGCAG AAGGATCGCG AGCAAGTCAA GCACACGACG 
AAGAAGCCGT GGCGCCAGAA GGGTACGGGC CGCGCTCGTG CCGGTATGTC GTCGAGCCCG 
TTGTGGCGTG GCGGTGGTCG GATTTTCCCG AACTCGCCCG ACGAAAACTT CTCGCACAAG 
GTCAACAAGA AGATGCATCG CGCAGGTCTC TGCTCGATCT TCTCGCAGCT GGCCCGCGAA 
GGCCGTCTGT CGGTCGTCGA GGACATCGTT CTCGAAGCGC CGAAGACCAA GCTGCTGGCC 
GACAAGTTCA AGGCCATGGG TCTCGATTCC GTGCTCGTCA TCACCGACAC GGTCGACGAA 
AACCTGTACC TCGCGTCGCG CAACCTGCCC CACGTGGCGG TTGTCGAGCC GCGCTACGCT 
GACCCGCTGT CGCTGATCTA CTTCAAGAAA GTGCTGGTCA CGAAGGCTGC GGTCGCCCAG 
ATCGAGGAGT TGTTGTCATG A 

 

Protein sequence

MELKLLNSNG QEGAVVNASD VVFGRDYNEA LIHQVVVAYQ ANARQGNRAQ KDREQVKHTT 
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPDENFSHK VNKKMHRAGL CSIFSQLARE 
GRLSVVEDIV LEAPKTKLLA DKFKAMGLDS VLVITDTVDE NLYLASRNLP HVAVVEPRYA 
DPLSLIYFKK VLVTKAAVAQ IEELLS