| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3143 |
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| Symbol | rpoA |
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| ID | 4679948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 3120423 |
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| End bp | 3121400 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639847399 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_994430 |
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| Protein GI | 121599305 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.864372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCA GTTTGTTGAA ACCCAAGATC ATCGCCGTGG AATCGCTGGG CGAGAACCAC
GCGAAGGTGG TGATGGAGCC GTTCGAACGC GGTTACGGCC ACACCTTGGG CAATGCGCTT
CGCCGTGTGC TGCTGTCGTC GATGGTCGGT TACGCGCCGA CCGAAGTGAC GATCGCCGGC
GTCGTGCACG AGTATTCGAC GCTCGATGGT GTGCAAGAGG ACGTCGTCAA CCTGCTGCTG
AACCTGAAGG GCGTGGTGTT CAAGCTGCAT AACCGCGACG AAGTCACGGT GACGCTGCGC
AAGGAAGGCG AAGGCGTCGT GACGGCCGGC GATATCGAAC TGGCCCACGA TTGCGAAGTC
ATCAACCCGA ATCACGTGAT CGCGCATCTG TCGAAGGGCG GCAAGCTCGA CGTGCAGATC
AAGGTGGAAA AGGGCCGGGG CTACGTACCG GGCAACGTGC GCCGCTACGG CGACGAAACG
GCCAAGATCA TCGGCCGCAT CGTCCTCGAC GCATCGTTCT CGCCGGTTCG CCGCGTGAGC
TACACGGTCG AGAGCGCGCG CGTCGAGCAG CGTACCGACC TCGACAAGCT CGTGATGAAC
ATCGAAACGA GCGGCGTCAT CACGCCGGAA GAAGCGATCC GCCAGTCGGC ACGCATCCTC
GTCGACCAGC TGTCCGTATT CGCGGCGCTG GAAGGCACGG AAACGGCCGC GGAAGCCCCG
TCGCGCGCGC CGCAGATCGA TCCGATCCTG CTGCGCCCGG TCGACGACCT CGAGTTGACC
GTGCGTTCGG CGAACTGCCT GAAGGCCGAG AACATCTACT ACATCGGCGA TCTGATCCAG
CGCACGGAAA ACGAGCTGCT GAAGACGCCG AACCTCGGCC GCAAGTCGCT CAACGAGATC
AAGGAAGTGC TCGCTTCACG CGGTCTCACG CTGGGCATGA AGCTCGAGAA CTGGCCGCCG
GCCGGCCTCG ACAAGTAA
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| Protein sequence | MQTSLLKPKI IAVESLGENH AKVVMEPFER GYGHTLGNAL RRVLLSSMVG YAPTEVTIAG
VVHEYSTLDG VQEDVVNLLL NLKGVVFKLH NRDEVTVTLR KEGEGVVTAG DIELAHDCEV
INPNHVIAHL SKGGKLDVQI KVEKGRGYVP GNVRRYGDET AKIIGRIVLD ASFSPVRRVS
YTVESARVEQ RTDLDKLVMN IETSGVITPE EAIRQSARIL VDQLSVFAAL EGTETAAEAP
SRAPQIDPIL LRPVDDLELT VRSANCLKAE NIYYIGDLIQ RTENELLKTP NLGRKSLNEI
KEVLASRGLT LGMKLENWPP AGLDK
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