Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3096 |
Symbol | |
ID | 4680589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 3069222 |
End bp | 3070001 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639847353 |
Product | short chain dehydrogenase |
Protein accession | YP_994389 |
Protein GI | 121600507 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCC CTGCCCCGCT CAAGGTCTTC ATCACCGGCG CCTCCAGCGG GCTCGGCCTC GCGCTCGCCG CCGAATACGC GCGGCACGGC GCGACGCTCG GCCTCGTCGC CCGGCGCGCC GATGCGCTCG CCGAGTTCGC GCCACGCTTT CCCAAGGCCT CGATCTCGAT CTACCCGGCC GACGTGCGCG ACGCCGATGC GCTCGCGCTC GCCGCGTCGC GCTTCGTCGC CGCGCACGGG TGCCCCGACG TCGTGATCGC GAACGCCGGC ATCAGCAAGG GCGCGATCAC GGGCGAAGGC GATCTGGCCG CGTTCCGCGA GATCATGGAC GTCAACTACT ACGGGATGAT CGCGACGTTC GAGCCGTTCA TCGCGCCGAT GACGGCCGCG CGGCGCGGCA CGCTCGTCGG CATCGCGAGC GTGGCCGGCG TGCGCGGGCT GCCGGGCTCG GGCGCGTACA GCGCGTCGAA GGCGGCGGCG ATCAAGTATC TCGAGGCGCT GAGGGTCGAG CTGCGGCCCG CGCAAGTCGC GGTCGTGACG ATCGCGCCCG GCTACATCCG CACGCCGATG ACCGAGCACA ACCCGTATCC GATGCCGTTC CTGATGGATG CGGACCGCTT CGCGAAGCGC GCGGCGCTCG CGATCTCGCA GAAAACCGCG TTTCGCGTGA TTCCATGGCA GATGGGCATC GTCGCGAAGC TGCTGCACGT GATGCCGCGC TGGCTGTACG ATCGCCTGTT CGAGAAGGCG CCGCGCAAAC CCAGGGCGAA GGCGGGCTGA
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Protein sequence | MNAPAPLKVF ITGASSGLGL ALAAEYARHG ATLGLVARRA DALAEFAPRF PKASISIYPA DVRDADALAL AASRFVAAHG CPDVVIANAG ISKGAITGEG DLAAFREIMD VNYYGMIATF EPFIAPMTAA RRGTLVGIAS VAGVRGLPGS GAYSASKAAA IKYLEALRVE LRPAQVAVVT IAPGYIRTPM TEHNPYPMPF LMDADRFAKR AALAISQKTA FRVIPWQMGI VAKLLHVMPR WLYDRLFEKA PRKPRAKAG
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