Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A2669 |
Symbol | |
ID | 4681556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 2643402 |
End bp | 2645060 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639846927 |
Product | major facilitator family transporter |
Protein accession | YP_993965 |
Protein GI | 121600855 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.381199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACGG TTGGCGGACA AATTGCGCAC GCGCCGATGA CGGGCGACGA AAAGCGCGTG ATCTTCGCAT CGTCGCTCGG CACCGTGTTC GAGTGGTACG ACTTCTATCT GGCCGGCTCG CTCGCGGCCT ACATCAGCAA GAGCTTCTTT TCAGGCGTCA ACCCGACCGC CGTGTTCATC TTCACGCTGC TCGGCTTCGC GGCGGGCTTC GCCGTCCGAC CGTTCGGCGC GATCGTGTTC GGCCGCCTCG GCGACCTCGT GGGACGCAAG CATACGTTCC TCATCACGAT CGTGATCATG GGGATCTCGA CGTTCGTCGT CGGCTTCCTG CCGGGCTACG CGTCGATCGG CATCGCCGCG CCCGTGATCT TCATCGCGAT GCGGCTGCTG CAAGGCCTCG CGCTCGGCGG CGAATACGGC GGCGCGGCGA CATACGTGGC CGAGCATGCA CCCTCGCACC GCCGCGGCTT CTATACGTCG TGGATCCAGA CGACCGCGAC GCTCGGCCTG TTCCTGTCGC TCCTCGTGAT TCTCGGCGTG CGCACCGCGA TCGGCGAGGA AGCATTCGGC AGTTGGGGCT GGCGCGTGCC GTTCGTCGCG TCGATCCTGC TGCTCGCCGT ATCCGTGTGG ATCCGCCTGC AACTGAACGA ATCGCCGGTG TTCCTGCGGA TCAAGGCCGA GGGCAAGACG TCGAAGGCGC CGCTCACCGA AGCGTTCGGC CAGTGGAAGA ACCTGAAGAT CGTGATCCTC GCGCTCATCG GGCTGACGGC GGGCCAGGCG GTGGTCTGGT ACACGGGCCA GTTCTATGCG CTCTTCTTCC TCACGCAGAC GCTGAAGGTC GACGGCGCGA GCGCGAACAT CCTGATCGCG CTCGCCCTTC TGATCGGCAC GCCGTTCTTC GTGTTCTTCG GCTCGCTGTC CGACAGGATC GGCCGCAAGC CGATCATCCT CGCCGGCTGC CTGATCGCCG CGCTCACCTA CTTCCCGCTC TTCAAGGCGC TCACGCACTT CGCGAATCCG GCGCTCGAGG CGGCGACGCA AAAGGCGCCG ATCACGGTGG TCGCCAATCC CGACGAATGC TCGTTCCAGT TCAACCCGGT GGGCACGGCG AAGTTCACGT CGTCCTGCGA CATCGCGAAA AGCGCGCTCG CGAAATCGGG CCTCAATTAC GAGAACGTCG CCGCGCCGGC GGGCACGCTT GCGCAGATCA AGATCGGCGA CACGGCGATC GCCACGTACG ACGGCAAGGC CGCCGACGCA AAAGACCAGG CGAAGGCGTT CGACAAGACG CTCGCGTCGA CGCTGAAGGC GGCGGGCTAC CCGGCGAAAG CCGACCCGGC CCGGCTCAAC TGGCCGATGA CGACGGTGAT CCTCGCGATA CTCGTGATCT ACGTGACGAT GGTGTACGGG CCGATCGCGG CGATGCTGGT CGAGATGTTC CCGACGCGGA TTCGCTATAC GTCGATGTCG CTGCCGTATC ACATCGGCAA CGGCTGGTTC GGCGGCTTCC TGCCGGCGAC GGCGTTCGCG ATCGTCGCGG CGAAGGGCGA CATCTATTCG GGGCTCTGGT ATCCGATCGG CGTCGCGCTC GTCACGTTCG TGATCGGACT GCTGTTCGTG AAGGAAACCA AGGATTCGAA TATCTACGCG CAGGATTGA
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Protein sequence | MATVGGQIAH APMTGDEKRV IFASSLGTVF EWYDFYLAGS LAAYISKSFF SGVNPTAVFI FTLLGFAAGF AVRPFGAIVF GRLGDLVGRK HTFLITIVIM GISTFVVGFL PGYASIGIAA PVIFIAMRLL QGLALGGEYG GAATYVAEHA PSHRRGFYTS WIQTTATLGL FLSLLVILGV RTAIGEEAFG SWGWRVPFVA SILLLAVSVW IRLQLNESPV FLRIKAEGKT SKAPLTEAFG QWKNLKIVIL ALIGLTAGQA VVWYTGQFYA LFFLTQTLKV DGASANILIA LALLIGTPFF VFFGSLSDRI GRKPIILAGC LIAALTYFPL FKALTHFANP ALEAATQKAP ITVVANPDEC SFQFNPVGTA KFTSSCDIAK SALAKSGLNY ENVAAPAGTL AQIKIGDTAI ATYDGKAADA KDQAKAFDKT LASTLKAAGY PAKADPARLN WPMTTVILAI LVIYVTMVYG PIAAMLVEMF PTRIRYTSMS LPYHIGNGWF GGFLPATAFA IVAAKGDIYS GLWYPIGVAL VTFVIGLLFV KETKDSNIYA QD
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