| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2109 |
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| Symbol | |
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| ID | 4679293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 2085757 |
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| End bp | 2088567 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639846373 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_993422 |
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| Protein GI | 121599743 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.556934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATGACT TCGGCCGTGA CGCCGCTCGC GAGGTCCGAC AGCAGAAACG CGCCCGCGTT
GCCGACCTGC TCGATCGTCA CGTTGCGCTT GAGCGGCGAG TTGCTCTCGA CGAAATCGAG
GATCTTGCCG AAGCTCTTGA TGCCGCTTGC CGCGAGCGTC TTGATCGGGC CCGCCGAGAT
CGCGTTCACG CGCACGCCCT TCGCGCCGAG CGACACCGCG AGATAGCGCA CGCTCGCCTC
GAGCGCCGCC TTCGCGAGGC CCATCGTGTT GTAGTTCGGG ATCGCCCGCT CCGCGCCGAG
ATACGACAGC GTGAGCAGCG ACGCATCGTC CGACAGCATC GGCAGCGCCG CCTTCGCGAG
CGCGGGGAAG CTGTATGCGG AGATGTCGTG CGCGATGCGG AAGTTCTCGC GCGTGAGGCC
GTCGAGGAAG TCGCCCGCGA TCGCCTCGCG CGGCGCGAAG CCGATCGAGT GGACGAGGCC
GTCGAGCGAA TCCCAGTGTG TCTTCAGCGA CGCGAAGAGC GCATCGATCT GCGCATCGTC
GGCGACATCG CACGGGAACA CGAGTTCGCT GCCGAACTCG GCCGCGAACT CGGTGATGCG
ATCCTTGAAG CGATCGCCGA CGTAGGTGAA CGCCAGCTCG GCGCCTTCGC GCTTGCACGC
CTTGGCGATG CCGTAAGCGA TCGAACGGTT CGACAAGAGG CCCGTCAGCA GAATACGTTT
ACCGTCGAGA AAGCCCATGA ATTCTCCTAT GTGTGGCGCC CGCGCCCGCA CGGTCGGCGG
GCTGCGTTTG GCTGCAACCG GTTGCGAATG GGTAGAATTC TCTCACATCG CCATCCTCGA
ACGACTGCCA ACACTTCCAT GACGATCGGT TCGCCCCGGG CCCGCCGGCC GCGATCGCCG
CAACGCGCGG CGCCATCAAA ACAGGCCGCG CGCGCCGCCG CGCCGCGACA GGCGGCCCGC
GCGCGCGCCG CGCTCGCGCG CTTCGCGCGC CGGGCGGCGG CGGGCGTCAC GCTCGCCTTC
GTCGCGGTGC CCGCGGCGCA CGCCGTCTAC GCGATCGCGC AGTACGGCGA GCCGAAGTAT
CCGGCGGGCT TCGCGCATTT CGACTACGTG AACCCCGACG CGCCGAAGGG CGGCACGCTC
GTGCTCGCGA ACCCGAACCG GCTCACGACG TTCGACAAGT TCAATCCGTT CACGATGCGC
GGCAACCCGG CGCCCGGAAT CGACCTGCTG TTCGAGAGCC TGACGACGGG CAGCGCCGAC
GAGCCCGCCT CCGCGTACGG CCTGCTCGCG GACGACATCG CCGTCGCGCC GGACGGCCTG
TCGGTCACGT TCCATCTGAA TCCGCGCGCG CGCTTCTCGA ACGGAGAACC CGTCACCGCG
GCGGACGTCA AGTATTCGTT CGACACGCTG AAGAGCCCGA AGGCGGCGCC GCAATACCCG
GCGTACTACG CGGACATCGC GCGCGCGGTG ATCGTCGACG CGGCGACCGT GCGCTTCGAG
TTTCGCCGCA AGAACCGCGA GCTGCCGCTG ATCGCGGGCG GCATCCCGGT GTTCTCGCGC
AAATGGGGCG TGCGCGCGGA CGGCTCGCAC ATCGCGTTCG ACCAGATCGC GTTCGAGCAG
CCGATCGGCA GCGGCCCGTA CCTGATCGAG CGCTACGACA GCGGGCGCAC GATCACGTAC
CGGCGCAATC CCGCCTACTG GGGCGCGGCG CTGCCCGTGC GGATCGGCAC GAACAACTTC
GAGCGCATCG TCTACAAGCT GTACGGCGAC GGCGTCGCGC GGCTCGAGGC GTTCAAGGCC
GGCGAATACG ACGTGCTCGT CGAGTACATC GCGCGCAACT GGGCGCGGCG CGACGTCGGC
AAGCGCTTCG ACAGCGGCGA GCTCGTCAAG CGCGAGTTCC GCCAGCACAA CGGCGCGGGA
ATGCAGGGCT TCTTCATGAA CCTGCGCCGG CCGCTGTTCC AGGACGTGCG CGTGCGCCAC
GCGCTCGATC TCGCGTTCGA TTTCGAATGG CTGAACCGGC AGCTCTTCTA TGGCGCGTAC
ACGCGCCTGA ACAGCTATTT CGCCGATACC GACCTGCAGG CGACGGGCAC GCCGAGCGCG
GGCGAGCTCG CGCTGCTCGC CCCGTTGCGC GCGCAGCTCG ACCCGGCCGT GTTCGGGCCG
ATGACCGTGC AGCCGAGCAC CGATTTGCCC GCGTCGCTGC GCGCGAACCT GCTGAAGGCG
CGCGCGCTGC TCGCCGAGGC CGGCTGGACC TACCGCGACG GCGCGCTGCG CAACGCGAAG
GGCGAGCCGT TCGTGTTCGA GATTCTCGAC GATTCGGGCT CGGCGTTCGA GCCGGTGGTC
GCCGCGTACA TCCGCAATCT CGCGAAGCTC GGGATCGTCG TGAAGTACCG GACGGCCGAT
TTCGCGCTGC TGCAAAAGCG CCTCGACGCG TTCGACTACG ACATGACGAC GGTCCGCTAC
CCGGGCGTCC AGGTGCCGGG CGCCGAGCAG GTCGCACGCT TCGCGAGCCG CTATGCGGAC
GAGCCGGGCT CGGACAACCT GACGGGGCTC AAGTCGCCCG CGGTCGACGC GATCCTGAAG
GCGCTCACGC AGGCCGAGAC GCGCGACGAA CTGCTCGACG CGACGCACGC GCTCGACCGC
GTGCTGATGC ACGGCTACTA TGCGGTGCCG CAGTGGTACA GCGCCGTGCA CCGGATCGCG
TTCAAGCGCA CGCTCGCCTA CCCGTCGGTG CTGCCGCTGT ACTATTCGGC GGAAGGCTGG
GTCGCCTCGA CGTGGTGGGC GAGGCCCGAG CATGGCGCGT CCGCGCGTTA G
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| Protein sequence | MHDFGRDAAR EVRQQKRARV ADLLDRHVAL ERRVALDEIE DLAEALDAAC RERLDRARRD
RVHAHALRAE RHREIAHARL ERRLREAHRV VVRDRPLRAE IRQREQRRIV RQHRQRRLRE
RGEAVCGDVV RDAEVLAREA VEEVARDRLA RREADRVDEA VERIPVCLQR REERIDLRIV
GDIAREHEFA AELGRELGDA ILEAIADVGE RQLGAFALAR LGDAVSDRTV RQEARQQNTF
TVEKAHEFSY VWRPRPHGRR AAFGCNRLRM GRILSHRHPR TTANTSMTIG SPRARRPRSP
QRAAPSKQAA RAAAPRQAAR ARAALARFAR RAAAGVTLAF VAVPAAHAVY AIAQYGEPKY
PAGFAHFDYV NPDAPKGGTL VLANPNRLTT FDKFNPFTMR GNPAPGIDLL FESLTTGSAD
EPASAYGLLA DDIAVAPDGL SVTFHLNPRA RFSNGEPVTA ADVKYSFDTL KSPKAAPQYP
AYYADIARAV IVDAATVRFE FRRKNRELPL IAGGIPVFSR KWGVRADGSH IAFDQIAFEQ
PIGSGPYLIE RYDSGRTITY RRNPAYWGAA LPVRIGTNNF ERIVYKLYGD GVARLEAFKA
GEYDVLVEYI ARNWARRDVG KRFDSGELVK REFRQHNGAG MQGFFMNLRR PLFQDVRVRH
ALDLAFDFEW LNRQLFYGAY TRLNSYFADT DLQATGTPSA GELALLAPLR AQLDPAVFGP
MTVQPSTDLP ASLRANLLKA RALLAEAGWT YRDGALRNAK GEPFVFEILD DSGSAFEPVV
AAYIRNLAKL GIVVKYRTAD FALLQKRLDA FDYDMTTVRY PGVQVPGAEQ VARFASRYAD
EPGSDNLTGL KSPAVDAILK ALTQAETRDE LLDATHALDR VLMHGYYAVP QWYSAVHRIA
FKRTLAYPSV LPLYYSAEGW VASTWWARPE HGASAR
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