Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1987 |
Symbol | ispD |
ID | 4679100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1961851 |
End bp | 1962561 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639846251 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_993303 |
Protein GI | 121598690 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.082533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTCCC GACTTTTTGC CCTGATTCCG TGCGCCGGCA CCGGCAGCCG TTCCGGCTCG GCATTGCCGA AGCAATACCG CACGCTCGCC GGACGCGCGC TGCTGCACTA CACGCTTGCC GCGTTCGACG CATGCAGCGA GTTCGCGCAG ACGCTCGTCG TGATCTCTCC CGACGACGCC CACTTCGACG CGCGCCGCTT CGCCGGCCTG CGCTTCGCGG TGCGGCGCTG CGGCGGCGCG TCGCGGCAGG CGTCGGTGAT GAACGGGCTG ATCCAGCTCG CCGAATTCGG CGCGACGGAC GCCGACTGGG TGCTCGTGCA CGACGCCGCG CGCCCCGGCA TCACGCCGGC GCTGATCCGC ACGCTGATCG GCGCGCTGAA GGACGACCCC GTCGGCGGCA TCGTCGCGCT GCCGGTCGCC GACACGCTCA AGCGCGTGCC GGCGGGCGGC GACGCGATCG AGCGCACCGA ATCGCGCAAC GGCCTCTGGC AGGCGCAGAC GCCGCAGATG TTCCGCATCG GCATGCTGCG CGACGCGATC CGGCGCGCGC AGCTCGATGG CCACGACCTG ACCGACGAGG CGAGCGCGAT CGAATGGGCG GGCCACACGC CGCGCGTCGT GCAGGGCAGC CTGCGCAACT TCAAGGTCAC CTATCCGGAG GATTTCGACC TCGCGGAGGC GATCCTCGCG CAACCGGCGC GCGCTTCCTG A
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Protein sequence | MTSRLFALIP CAGTGSRSGS ALPKQYRTLA GRALLHYTLA AFDACSEFAQ TLVVISPDDA HFDARRFAGL RFAVRRCGGA SRQASVMNGL IQLAEFGATD ADWVLVHDAA RPGITPALIR TLIGALKDDP VGGIVALPVA DTLKRVPAGG DAIERTESRN GLWQAQTPQM FRIGMLRDAI RRAQLDGHDL TDEASAIEWA GHTPRVVQGS LRNFKVTYPE DFDLAEAILA QPARAS
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