Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1981 |
Symbol | |
ID | 4681376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1958264 |
End bp | 1959601 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639846245 |
Product | sensor histidine kinase RisS |
Protein accession | YP_993297 |
Protein GI | 121598604 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0389833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCTCG TGTTCGGCGG GCTGTTCTGG CGCACCTTCC TGCTGATCGC GCTGTTGATC GCAGTCAGCC TCGCCGCGTG GTTCCAGAGC TTCCGAGTGA TCGAGCGCGA GCCGCGCGCG CAGCGCGTCG CGCTGCAGCT CGTCGCCATC GTGAAGCTCA CGCGCACGGC CCTGCTCTAT TCCGATCCCG ATCTGCGCCG CGCGCTGCTG CAGGATCTCG AGAGCAACGA AGGCGTGCGC GTCTATCCGC GCGAGAAAAC CGACAAATTC AAGCTGCAGC CCGACGAATC GGTGAACCGG CTGATCGAGC ACGACATCCG CAGCCGCCTG GGCGACGACA CGGTGATCGC GCAATCGGTC AACGACATCC CCGGCGTGTG GATCAGCTTC AAGATCGACG ACGACGACTA TTGGGTCGCG CTCGACCGCG ATCAGCTCGA TACCGTCACC GGCCTGCAAT GGGCCGGCTG GGGCCTCTTC GCGCTCGCGC TGTCGCTGAT CGGCTCGGCG TTCATCACGA GCCTCGTGAA CCAGCCGTTC TCGCGGCTCG CGCTCGCCGC CCGCAAGGTG GGCTCCGGCC AAACGCCGGA ACCGCTGCCC GAGCGGGGAA TGGGCGTCGC CACAGAGACG AACCGCAGCT TCAACCAGAT GGTTCGCGAC CTCGAGCAGC TCGAGGCCGA TCGCGCGCTG ATGCTCGCGG GGATCTCGCA CGATCTGCGC ACGCCGCTCG CGCGGCTGCG CCTCGAAACC GAAATGAGCC CGTCCGACCA GGCGACGAAG GACGCGATGG TCGACGACAT CGAGCAGATG GACCGCATCA TCGCCGCGTT CATCGATTAC GCGCGCCCCG CGCAGCGCAC GCCGGAGCCC GTCGATCTGT CGCAGGTCGC CCGCGAGGTT GCCGCGCGGA TCGTCAGCGA GGACGGTGTG CAGCTCGATA TCCGCCTCGC GCCCGCGGCC GTGATCGAAG CCGACGAAAC GGACATGCGC CGCGTGATCG GCAATCTCGT CGAGAACGCG CGCAAGTACG GGCAGAGCAA GCAGGACGGC ATCGCGCGCA TCCTGCTTGA AACGCGGGTC ACGCACGCGC GCGTCGAGCT CGTCGTCGCC GACGAGGGCC CCGGCATCCC CGAGGATCAG TTGCCGCTCG TGATGCGCCC GTTCTATCGC GTCGACACCG CGCGCAGCAA GGCCGACGGC ACCGGCCTCG GCATGGCGAT CGTGCTGCGC CTCGTCAATC GCTACCGCGG CGCGCTGCGG CTGCGCAACC GCACGCCCGA CGCGGGCCTC GAAGTCACGC TGGAGTTTCC GAGCGCCAAA GCGCGTGCGG CTGCGTGA
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Protein sequence | MTLVFGGLFW RTFLLIALLI AVSLAAWFQS FRVIEREPRA QRVALQLVAI VKLTRTALLY SDPDLRRALL QDLESNEGVR VYPREKTDKF KLQPDESVNR LIEHDIRSRL GDDTVIAQSV NDIPGVWISF KIDDDDYWVA LDRDQLDTVT GLQWAGWGLF ALALSLIGSA FITSLVNQPF SRLALAARKV GSGQTPEPLP ERGMGVATET NRSFNQMVRD LEQLEADRAL MLAGISHDLR TPLARLRLET EMSPSDQATK DAMVDDIEQM DRIIAAFIDY ARPAQRTPEP VDLSQVAREV AARIVSEDGV QLDIRLAPAA VIEADETDMR RVIGNLVENA RKYGQSKQDG IARILLETRV THARVELVVA DEGPGIPEDQ LPLVMRPFYR VDTARSKADG TGLGMAIVLR LVNRYRGALR LRNRTPDAGL EVTLEFPSAK ARAAA
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