Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1575 |
Symbol | |
ID | 4678654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1550138 |
End bp | 1551541 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639845842 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_992901 |
Protein GI | 121600159 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.660118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCG GCGACTTTCG CGTGACCGCG GCCGTCGTCG CGAGCGCGCT CTTCATGCAG AACCTCGACA GCACGGTCGT CGCGACCGCG CTGCCGAGCA TGGCGCGCGA GCTTGGCGTG AACGTCGTGT TCCTGAGCAG CGCGATCACG TCGTACCTCG TCGCGCTGAC GGTGTTCATT CCGGTGAGCG GCTGGATCGC GGAGCGCTTC GGCGCGAAGC GCGTGTTCAT CGCCGCGATC GCGATCTTCA CGGCGGCGTC CGTGATGTGC GCGGCGGCGA ACGGGCTCGC GACGCTGGTC GCCGCGCGCA TCCTGCAGGG CGCGGGCGGC GCGCTGATGG TGCCCGTCGG CCGCCTGATC CTCTATCGCG GCGTGTCGCG CCACGAGATG CTCGCGGCGA CCACCTGGCT CACGATGCCC GCGCTCGTCG GCCCGCTGCT CGGGCCGCCG CTCGGCGGCT TTTTGACCGA TGCGCTGTCG TGGCGCGCGG TGTTCTGGAT CAACGTGCCG GTCGGCGTCG CGGGCGCGGC GCTCGCCGCG CGCCTCGTCC CCGCGTCGGC CGGCGAGCGT CGCGCGCCCG CCGACGCGCG CGGCATGCTG CTCGTCGGCG CGGCACTCGC CGCGCTGATG CTCGGCGTCG AGACCGCGGG CCGCGGCGTG CTGCCGGCGG GGGCGCCCGC CCTGTGCCTC GGCGCGGGCG TCGCGCTCGG CGGGCTCGCG ATCCGCCATT GCCGGCGCGT CGCGCATCCG GCCGTCGATC TGTCGCTGCT CGGCATTCCG ACCTTTCACG CGGCGACGAT CGCGGGCAGC CTGTTCCGCG CGGGGGCCGG CGCGCTGCCG TTTCTCGTGC CGCTCACGCT GCAGGTCGGC TTCGGCGCGA GCGCGTCGAG AAGCGGCGCC ATCACGCTCG CGAGCGCGCT CGGCTCGCTC GTGATGCGGC CGATGACGCA TGCGGCGCTG CATCGCGCGC CGATGCGCAC GGTGCTGATC GCGGGCAGCG TGTCGTTCGC GGCCGTGCTC GCCGCGTGCG CGACGCTATC GCCCGCGTGG CCGGATGCGG CCGTCTTCGC GCTGCTGCTC GTCGGCGGGC TGTCGCGCTC GCTCAGCTTC GCGTCGCTCG GCGCGCTCGT ATTCTCGGAC GTGCCGAGCG AGCGCCTGTC GGCCGCGACG TCGTTCCAGG GAACCGCGCA GCAGTTGATG CGGGCGGTGG GCGTCGCCGT CGCGGCGGGC GCGCTGCATC TGGCGATGCT GATCGGCGGG CGCGGCCAGG CGAGCCGGAC GGATTTCGCC TGCGCGTTCG CGGCGATCGC GCTCGTCGTG CTCGCGTCGG TGCCGATGTT CGCCGCGCTG CCGGCCGACG CCGGCGAAGG GCTCGCGGGG CCGGCGCGCC GGCCGAGGCC ATGA
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Protein sequence | MRAGDFRVTA AVVASALFMQ NLDSTVVATA LPSMARELGV NVVFLSSAIT SYLVALTVFI PVSGWIAERF GAKRVFIAAI AIFTAASVMC AAANGLATLV AARILQGAGG ALMVPVGRLI LYRGVSRHEM LAATTWLTMP ALVGPLLGPP LGGFLTDALS WRAVFWINVP VGVAGAALAA RLVPASAGER RAPADARGML LVGAALAALM LGVETAGRGV LPAGAPALCL GAGVALGGLA IRHCRRVAHP AVDLSLLGIP TFHAATIAGS LFRAGAGALP FLVPLTLQVG FGASASRSGA ITLASALGSL VMRPMTHAAL HRAPMRTVLI AGSVSFAAVL AACATLSPAW PDAAVFALLL VGGLSRSLSF ASLGALVFSD VPSERLSAAT SFQGTAQQLM RAVGVAVAAG ALHLAMLIGG RGQASRTDFA CAFAAIALVV LASVPMFAAL PADAGEGLAG PARRPRP
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