| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1567 |
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| Symbol | |
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| ID | 4681212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 1540836 |
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| End bp | 1542059 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639845834 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_992893 |
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| Protein GI | 121600305 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0706686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCTC GCGCGGCCCG GCAGCTTCCC GGCAACCGCC GGCTCGCGCG CCTCGCCGGC
GCCGCCGCCG CGGCATGCGC CGCCGGCTTC GGCGCGAGCA CGGCTCACGC GCAAAGCAGC
GTCGTGCTGT ACGGCCTGAT CGATACGTCG ATCACCTACG CGAACAACCA GCGCACCCAC
GGAGCCGGCT CGCCGGGAAG CCCCGGCTGG GCCGTGACGA GCGGCGCGCT CAATGCGTCA
CGCTGGGGAT TGCGCGGCCG CGAAGACCTC GGCGACGGCG TGTCGGCGAT CTTCGCGCTC
GAGAACGGCT TCTCGGGGGC GAGCGGCGCG CTATCGCAAA AGGGCGTCGA CATGTTCGGC
CGGCAGGCAT GGATCGGACT GAAATCGAAG GAAGGGGGCG CGCTCACGCT CGGCCGCCAG
TACGACCTCA TCCTGGATTT CGTCACGCCG CTCGGCGCGT CGGGGCCCGG CTGGGGCGGC
AACCTCGCCG TTCACCCGTA CGACAACGAC GACTCGAACC GCAACATCCG CATCAACAAC
GCGGTCAAGT ACACGAGCCC GACATACCGC GGATGGACCC TCGGCGCAAT GTACGGCTTC
TCGAACACGG CGGGCCCGTT CGGCAACAAC GCGGCGTGGA GCGCGGGCCT GTCCTATGCG
AACGGCCCGC TGAAACTCGG CGCCGGCTAT CTGAGAATCA ATCGGAATCC GAACGCCGCG
AACGCGAACG GCGCGCTGAG CACGACGGAC GGCTCGGCGA CGATCACGGG CGGCAGCCAG
CAGATCTGGG CCGTCGCGGG CCGCTATGCG TTCGGGCCGC ATTCGATCGG CGCCGCGTGG
TCCCATTCGG CCACCGACCG CGTGAGCGGC GTGCTCCAGG GCGGCAGCAT CGCGAAGCTC
GACGGCAAGT CGCTCGTCTT CGACAATTTC ACGCTCGACG GGCGCTACGT CGTCACGCCG
AGGTTGAGCC TCGCGGCGGC GTACACGTAC ACGATGGGCC GCTTCGACGC GCGCTCGGGC
GAAACCCGTC CGAAGTGGAA TCACATGGTC GCGCAAGCCG ATTACGCGTT CTCGATCCGC
ACGGACGCGT ATCTCGAGGC CGTCTATCAG CGCGTGAGCG GCGGCAACGG CATTCCGGCG
TTCAACGCGA CGATCTGGAC GCTGACGCCG TCCGCGAACG GCAATCAGGT CGTTGTCGCG
CTGGGGCTGC GGCATCGGTT CTAG
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| Protein sequence | MSARAARQLP GNRRLARLAG AAAAACAAGF GASTAHAQSS VVLYGLIDTS ITYANNQRTH
GAGSPGSPGW AVTSGALNAS RWGLRGREDL GDGVSAIFAL ENGFSGASGA LSQKGVDMFG
RQAWIGLKSK EGGALTLGRQ YDLILDFVTP LGASGPGWGG NLAVHPYDND DSNRNIRINN
AVKYTSPTYR GWTLGAMYGF SNTAGPFGNN AAWSAGLSYA NGPLKLGAGY LRINRNPNAA
NANGALSTTD GSATITGGSQ QIWAVAGRYA FGPHSIGAAW SHSATDRVSG VLQGGSIAKL
DGKSLVFDNF TLDGRYVVTP RLSLAAAYTY TMGRFDARSG ETRPKWNHMV AQADYAFSIR
TDAYLEAVYQ RVSGGNGIPA FNATIWTLTP SANGNQVVVA LGLRHRF
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