Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1447 |
Symbol | |
ID | 4678785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1415432 |
End bp | 1416544 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639845717 |
Product | carbohydrate ABC transporter periplasmic sugar-binding protein |
Protein accession | YP_992778 |
Protein GI | 121599648 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.476916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCGTGA ACGCGGCCCG ACCCGCGTTC GCCCGAAAAC GACAGACAGA GAAAGGTGGA GACATGAGAC TTTGCACTGG CAAGGCCGTC CTGCGCGCAT GCGTCGCCGC GATCGCCGTC GCGGCGGGCG TGGGCGGCGC GGCCCCGGCA GCCCAGGCGG CGGGCGCGCG CTTCGCGCTC GTGAGCCACG CGCCCGATTC CGATTCGTGG TGGAACACGA TCAAGAACGC GATCAAGCAG GCGGACGAGG ATTTCGATGT CACGACCGAT TACCGCAATC CGCCGAACGG CGACATCGCC GACATGGCGC GCCTGATCGA GCAATCGGCC GCGCGCGACT ACGACGGCGT GATCACGACG ATCGCCGATT ACGACGTGCT GAAGAATTCG CTGAAGAAAG TCACCGCGAA GAAGATCCCG CTCGTGACGA TCAACTCCGG CACCGAAGAA CAGAGCGCGC AACTGGGCGC GATCATGCAT GTCGGCCAGC CCGAGTACGT CGCGGGTCAC GCGGCGGGCG AGAAGGCGAA GGCGGCCGGC GTGAAGCGCT TCCTCTGCGT GAACCACATC GCGACCAACA GCGTGTCGTT CGACCGCTGT CGCGGCTTCG CCGACGCGAT CGGCGCCGAC TACAAGAGCT CGACGATCGA CTCCGGCCAG GACCCGACCG AGATCCAGTC GAAGGTGAGC GCGTACCTGC GCAACCATCC GAACACGCAG GCGATCCTCA CGCTCGGCCC GGTGCCCGCC GCGGCGTCGC TGAAGGCGGT GCAGCAGATG GGCCTCGCGA ACAAGCTGTT CTTCGCGACG TTCGATTTCT CCGACGACAT CGCGAAGGCG ATCCAGAGCG GCGCGATCAA GTTCGCGATC GACCAGCAGC CGTACTTGCA GGGCTACATC CCGGTGGCCG TGCTCGCGAT CGCGAAGCAG AACAAGACCA CCGATCCCGC GAAGATCCGC CAGATCCTCG AGGCGAACCC GAAATTCCAG GCGCGGCTGT CGACCTACGG GCTGCAGCCG TCGTACGGGC CGAAGAACAT CCGCTCGGGC CCGGGCTTCA TCACGAAGGA GAACCTCGAG AAGGTGATCA AGTACGCGGG CCAGTACCGC TAA
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Protein sequence | MLVNAARPAF ARKRQTEKGG DMRLCTGKAV LRACVAAIAV AAGVGGAAPA AQAAGARFAL VSHAPDSDSW WNTIKNAIKQ ADEDFDVTTD YRNPPNGDIA DMARLIEQSA ARDYDGVITT IADYDVLKNS LKKVTAKKIP LVTINSGTEE QSAQLGAIMH VGQPEYVAGH AAGEKAKAAG VKRFLCVNHI ATNSVSFDRC RGFADAIGAD YKSSTIDSGQ DPTEIQSKVS AYLRNHPNTQ AILTLGPVPA AASLKAVQQM GLANKLFFAT FDFSDDIAKA IQSGAIKFAI DQQPYLQGYI PVAVLAIAKQ NKTTDPAKIR QILEANPKFQ ARLSTYGLQP SYGPKNIRSG PGFITKENLE KVIKYAGQYR
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