| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1412 |
|---|
| Symbol | |
|---|
| ID | 4679805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 1380390 |
|---|
| End bp | 1381805 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639845683 |
|---|
| Product | di-haem cytochrome c peroxidase family protein |
|---|
| Protein accession | YP_992744 |
|---|
| Protein GI | 121598245 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.779688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC GCTTGCCGCG ATACGCCCGC CAGCACCGTT CGTTCTTCGT CGCGCCGCGC
GCGTTCGCGG CCGCCGCCGC GCTTGCCGCG GGCGTCGCCG CGTGTGACGC GAACGGGCCG
GGCGCGAGCG CCGCCGCGGC CGTCGCGCCC GCTGTCCCAG CCGCTTCCGC TGCTTCCGCT
GCCTCCGCTG CCTCCGCTGC GCGTCCCGCG CCTCTCGCGC AGCCGGCCGC GCCCGCCGTC
GTCGACAGTC AGCCGCAGAC GCGCGCGCAG GTGTACGAGG CGGTCAAGCA GATGACGGCG
CTCGGCAGGC AGTTGTTCTT CGATCCTTCG CTGTCGGGCA GCGGCAAGCT CGCCTGCGCG
TCGTGCCACA GCCCGCAGCA CGCGTTCGGG CCGCCGAACG CGCTGCCCGC GCAATTCGGC
GGCGACGATC TGCGCCAGCA GGGCTTTCGC GCCGTGCCGA CGCTCAAATA CCTGCAGAAG
GTGCCCGCGT TCAGCGAGCA CTATCACGAA TCGGACGACG AGGGCGACGA GAGCGTCGAC
GCCGGCCCGA CGGGCGGGCT CACGTGGGAC GGCCGCGTGG ACAGCGGCGC CGAGCAGGCG
CGCGTGCCGC TCACGTCGCC GTTCGAGATG AACGGCACGC CCGAGAAGGT CGCGCGCGCG
GTGCGGGCCG CGCCGTACGC GCCCGCGTTT CGCGCGGCGT TCGGCGCGCG CGTGCTCGAC
GACGACCGCG CGACGTTCGA GGCGGTGCTG CAGGCGCTCG GCACGTTCGA GCAGGCGCCC
GACGTGTTCT ATCCGTACAC GAGCAAGTAC GACGCGTACC TGGCGGGCCG CGCGCGGTTG
ACGCGCGCCG AGCTGCACGG GCTGCAGGTC TTCAACGACG AGAAGAAGGG CAACTGCGCG
AGCTGCCACG TGAGCCGGCG CGGGCTCGAC GGCTCGCCGC CGCAGTTCAG CGATTTCGGC
CTGATCGCGC TCGGCGTGCC GCGCAATCGC GCGCTCGCGG TGAATCGGAA TCCGAATTTT
TACGACCTCG GCGCATGCGG GCCCGAGCGC CGGGACCTGA AGGGGCGCGA CGAGTTCTGC
GGGCTGTTCC GCACGCCGAC GCTGCGTAAC GTCGCGCTGA AGAAGACGTT CTTCCACAAC
GGCGTCTATC ACTCGCTCGA CGACGTGCTG CGCTTCTACG CCGAGCGCGA CACGCATCCG
GAAAAGTTCT ATCCGGTGAA GCGCGGCGTC GTTCAGAAGT TCGACGACTT GCCGAAGCGT
TACTGGAAGA ACCTGAACGA CGAGCCGCCG TTCGAGCGCA AGCGCGGCGA TCCGCCCGCG
ATGACCGATG CGGAGATCCG GGACGTGATC GCGTTCCTCG GCACGCTCAC CGACGGCTAC
GATCCGCGCG CGAAGCCGGC AGGCGGCGCG CGCTGA
|
|---|
| Protein sequence | MMRRLPRYAR QHRSFFVAPR AFAAAAALAA GVAACDANGP GASAAAAVAP AVPAASAASA
ASAASAARPA PLAQPAAPAV VDSQPQTRAQ VYEAVKQMTA LGRQLFFDPS LSGSGKLACA
SCHSPQHAFG PPNALPAQFG GDDLRQQGFR AVPTLKYLQK VPAFSEHYHE SDDEGDESVD
AGPTGGLTWD GRVDSGAEQA RVPLTSPFEM NGTPEKVARA VRAAPYAPAF RAAFGARVLD
DDRATFEAVL QALGTFEQAP DVFYPYTSKY DAYLAGRARL TRAELHGLQV FNDEKKGNCA
SCHVSRRGLD GSPPQFSDFG LIALGVPRNR ALAVNRNPNF YDLGACGPER RDLKGRDEFC
GLFRTPTLRN VALKKTFFHN GVYHSLDDVL RFYAERDTHP EKFYPVKRGV VQKFDDLPKR
YWKNLNDEPP FERKRGDPPA MTDAEIRDVI AFLGTLTDGY DPRAKPAGGA R
|
|---|
| |