| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1377 |
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| Symbol | |
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| ID | 4681600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 1348743 |
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| End bp | 1351550 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639845648 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_992709 |
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| Protein GI | 121601564 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.369821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGA TCACGCAATT CACGTCGCTT TTCAGCGCTG CCAATTGTCT CTATTGTCTC
GACGGTCCGG GCGAAATCGC GTCGCTGCAG ATCGAGCGCT GGGTGGGGCG GGAGACGCTC
TCCGAGAACT TCCAGTGGGA TGTCTACGCG CTCGCGACCG ATCCCGGCCT CGACCTCGAC
GCGATGCTCG GGCAGCGCGT GACGATCCGC ACGGCGCTCG CGAACGGCAC GAGCGCCGTG
CGCAGCGGGC TCGTGGCGCA GGCCGAGTGC ATCGGCTACG ACGCCGGCCT CGCGCGCTAC
TGCCTGCAGC TCGTGCCGTG GCTCGCCGCG CTCGCGCACG GCCGCGACGA GCGCACGTTC
GTGCGGCAGG GCGTCGCCGA CGTGCTCGGC GCGGTGTTCG CGCCGTACGG CGCGATCGCC
CGCTGGCGCT TCACCGCGGA CGCGAACCAG CGCATCGCGG AACTCGGCGC GCGCGACTAC
CGCGTGCAGT ACCGCACCCA CACGCATTTC GATTTCGTCC GGCACGTGCT TGCCGAAGCG
GGTCTCGGCT TTTGCTTCGT CGAGGAGGCG GACGCGCCCG CGGGCCACAC GATGCTGATC
TTCGACGACA GCACGCAGTT GCCCGAGGAC GAGACTTCCG CGCGCATGGG CGGCGTGCCG
CAGCGGCTGA GCGGCACGGC GACCGAGCCG GACGACGTGA TCGTCGGCAT CGGGCAGTCG
CTGTCGCTGA CCGCGGATCG CGTCACGCTG ATCAGCAGCG ACTACCGCGG CAACCAGTCG
ACGAGCGCGA CGGCGAGCCT CGGCAATCCG GCCGGATCGC GCGAGCTGTA CGACGACGTC
GGGCCGGAGG CGTTCGACAG CCTGCGCGAG GCCGACGCCG CCGCGCGGCG GCACGCGGAC
GCGATCGTCT CGGCGGCGCG CTTCTGGACA GGCTACGGCA CGTTGCGCAC CGCGCGCGCT
GGCCGCGCGC TGCGCATCGC GGGCGCGACG TGGCGCATGT CGCGCGGCGG CGCGCCGGCG
CCCGATGCGT TCGTGTTGAC GCGCGTCGAT CAGATCGGCA TCAACAATTT GCCCGCGACG
GTGATGGAGC GCGTCGAGCG CAGCCTCGGC CCGCTGCCGC CCGCGAATCT CGACGCGCGC
GTGCTCGCGC AGGCGAAGGC GGGCGGCTAT GCGAACCGGT TCGACGCCGC GCCGCGCGAC
CAGGCATGGC GCCCGACGCT GGAGGACGGC ACCGGCCAGC GACTGAACCC GGTGCCGACG
GCGCTCGGCG CGCAGACGGC GATCGTCGTC GGGCCGCAGG GCGAGACGCG GCCGGGCTCG
ACGGGCCCGG TGCATACCGA CGCGCAGGGC CGGTTGCGGC TGCGCTATCA CTGGCAGGCG
GACGGCGACG CGGGCACCTA TCCGACGCGC GCGATGCAGC GGCTCGCGAG CGAGGGGCAC
GGGCTGCAGC AGACGCCGCG GATCGGCCAC GAGGTGCTCG TGCAGTTCGT CAACGGCCTC
GTGCACCGGC CGATCGTGCT CGGCGGGCTG TTCAACGGCC GCGGCGAGGG CGGCGAAGCG
CCGACGCCCG GCGGCGAAGC GGGGCAGCCG CTCGACGAAT CGGTCTACGC ACAGGCGAGC
GACCACGCGG CGAGCGCGCA AGGCAATCTT GCGGGCGGCC ATAGCCCCGC GTGGCACGGC
GCGGGCGGCG GCGCGAAGCG CCACGATCAC GCGGGCGCGC TGTCCGGCTT CAAGAGCCAG
GAGTTCGACG GCCAGGGCTA CAACCAGCTC GTCGCGGACG ATACCGATCG CATGGGCCGC
ATGCAGATGG CGACGACGCA CGCGGCGACC CAGCTCAATA TCGGCCATTT GCGGCATCAG
GCCGACAACT ATCTCGGCAG CTTCCGCGGG CAAGGCGTCG AGCTGCGCTC GGACGCGTAC
GGCGCGCTGC GCGGCGCGCG CGGCGTGCTG ATCTCCAGCT ATGCGCCGAC GGGGCCGTCG
CAGCCGGCGG GCGATGCGTC GGCGCTGCAG TCGCTGCTCG CGCAACAGGC GGCGCTCGCG
AAGCTTCTCG ACAAATCGGC GGACACGCAC AAGACCTTGC CGTTCGCCGC GCAGCGTGGC
GCGCAGCGGG CCGGACAGTC GTCGATGAAC GGCGACGCCG CGCCGCTCGA CGCGCTCGGG
AAGAGTTTCG CGACGACGGT CGGCGCCGAC GGCTACGCGC AGGCGTCGGC CGACGCATCG
CGCCGCGCGA CGGGCAATGC GCTGCCGCAT ACCGGCGACG CGGTGCTCGG CGTCGAGGCG
AAGGGCGGCC AGGGGCTGCT GGCCGGCCAG TCGCTGCAAT GGGCGGCGGG CGAGACGCTG
ACCATCGGCA GCGGCAACGA CACCAACCTC GCGGTCAACC GGACGTTGCG CGTGCACAGC
GGGCAGGGCA TCGGCTGGCT TGCCGGCGCG AACGGCGCGA ACGGCGCGCA GGGCGTCGGC
ATGAGCGTGA TCGCCGGCAA GGACGATCTG GCGCTGCAGG CGCAGCACGA CCTGATGGCG
CTGCGCGCGC GCGACGATCT GAGGGTCGCG TCGATCGGCG CGGACGTCGA GATCGCGGCG
AAGCAGACCG TGCGGCTCGC GGTCAGCGGC GGCGCGCATC TGACGATCGA AGGCGGCAAC
GTCACGTTCG GCTGCCCGGG CTCGCTCGTC GTTCATGCGG CCCAGCATAC GTTCGTCGGG
CCGGATCAAC TGGCTCCCGC GCTGCCGCAG TTTCCCGAGA AGGTGTGCGT CGAATGCCTG
AAGCACGCGA TGCAATCGGG CAGCGCACTG GCCGGCAAGG CGATCTGA
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| Protein sequence | MSVITQFTSL FSAANCLYCL DGPGEIASLQ IERWVGRETL SENFQWDVYA LATDPGLDLD
AMLGQRVTIR TALANGTSAV RSGLVAQAEC IGYDAGLARY CLQLVPWLAA LAHGRDERTF
VRQGVADVLG AVFAPYGAIA RWRFTADANQ RIAELGARDY RVQYRTHTHF DFVRHVLAEA
GLGFCFVEEA DAPAGHTMLI FDDSTQLPED ETSARMGGVP QRLSGTATEP DDVIVGIGQS
LSLTADRVTL ISSDYRGNQS TSATASLGNP AGSRELYDDV GPEAFDSLRE ADAAARRHAD
AIVSAARFWT GYGTLRTARA GRALRIAGAT WRMSRGGAPA PDAFVLTRVD QIGINNLPAT
VMERVERSLG PLPPANLDAR VLAQAKAGGY ANRFDAAPRD QAWRPTLEDG TGQRLNPVPT
ALGAQTAIVV GPQGETRPGS TGPVHTDAQG RLRLRYHWQA DGDAGTYPTR AMQRLASEGH
GLQQTPRIGH EVLVQFVNGL VHRPIVLGGL FNGRGEGGEA PTPGGEAGQP LDESVYAQAS
DHAASAQGNL AGGHSPAWHG AGGGAKRHDH AGALSGFKSQ EFDGQGYNQL VADDTDRMGR
MQMATTHAAT QLNIGHLRHQ ADNYLGSFRG QGVELRSDAY GALRGARGVL ISSYAPTGPS
QPAGDASALQ SLLAQQAALA KLLDKSADTH KTLPFAAQRG AQRAGQSSMN GDAAPLDALG
KSFATTVGAD GYAQASADAS RRATGNALPH TGDAVLGVEA KGGQGLLAGQ SLQWAAGETL
TIGSGNDTNL AVNRTLRVHS GQGIGWLAGA NGANGAQGVG MSVIAGKDDL ALQAQHDLMA
LRARDDLRVA SIGADVEIAA KQTVRLAVSG GAHLTIEGGN VTFGCPGSLV VHAAQHTFVG
PDQLAPALPQ FPEKVCVECL KHAMQSGSAL AGKAI
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