| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1233 |
|---|
| Symbol | |
|---|
| ID | 4681326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1213375 |
|---|
| End bp | 1214706 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639845506 |
|---|
| Product | putative carotenoid 9,10-9',10' cleavage dioxygenase |
|---|
| Protein accession | YP_992568 |
|---|
| Protein GI | 121599280 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0130033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA TCGACCTGAA CGCGGGCGCG CTGGCGCCCG TGGCCGACGA AATCGACGCC
GTCGACCTGC GCGTGACGGG CGCGCTTGCG CGCGAGCTGA ACGGCGTGCT CGTGCGCAAC
GGGCCCAATC CGCTGCGCGG CCGCTTCGAC GGCGGCGACG TGCTGTCGTG GTGGCCGCAG
GACGCGATGC TGCACGCGAT ATCGTTCGAC GACGGCCGCG CGACCCGCTA CCGCAACCGC
TGGGCGCGCA CGCGGCGCTG GGCGCGCGTG CACGATCCGG CGCGCGAGCC GTCGCTCGTC
GACACGAATC CGAACGTCAA CGTGCTCGCT CACGCGGGCG AGATTCTCGC GCTCGCCGAG
GGCGGCGCGC CGCTCGCGAT CACGGCCGGG CTCGACAGCA TCGGCGCGGC GCGCCGCCAC
CCGGGGCTCG CGCACGGGAT GGCCGCGCAT CCGAAGGTCG ATCCGCACAC GGGCGAGCTG
ATCGCGTTTC GCGCCGACTG GAACCGGCCG TGGCTGCGCT ACCTCGTCGC GGACGCGGCC
GGCGCGCAGA CCGTCGACAC GGAGATCGCG CTGCCCGCGC CGTCGATGAT GCACGACATC
GCGATCACCG CGACGCACAG CATCGTGTTC GACCTGAACG TCGCGTATGA CTTCTCGATG
CTGTCGCGCG GCCATCGGAT GCCGCTGCGC TGGCACGACG CGCGCGGCGC GCGCATCGGC
GTCGTGCCGC GCCGCGGCGG CGATGCGCGC TGGTTCGACA TCGCGCCGTG CTTCATTCAG
CACGTCGTCA ACGCATACGA TCTCGACCGC CCGGCGATCG TGCTGGACGT GGTCCGCTAT
CCGTGGTTCC TGCGCGTCGC CCGCGACGGG CGCGGCTTCG ACGACAACCC GCCCGGCGTG
CTGTGGCGCT ACGTGATCGA TCTCGTGACG GGCACCGTCG CCGAGCAGCC GCTCGACGAC
GCCGGCATCG AGCTGCCCCG GATCGACGCG CGCCGCACCG GGCGCCGCCA CCGGTTCCTG
TACGCGGCCG AGCAGCCGAC CCCCGTGGAG CTGCGCGGCA TCGTGCGCTA CGACCTCGAC
GGCGGCTCGA CGCAGCGCTA CCGGGTGCCG CCCGGCGACC AGAACAGCGA GCCCGTGTTC
GTCCCGCGTC CGGGCGCGGC GGGCGAAGAC GACGGCTGGC TGCTCGTCTG CGTGTATCGC
CATGCAACGG ATACGAGCGA CGTCGTGATC CTCGACGGCC GGTCGATCGG CGACGGGCCG
ATCGCGACCG TGCACCTGCC GCGCCGCGTC CCGGCGGGTT TTCATGGCGC GTGGCTGCCG
GCCGGCGCAT GA
|
|---|
| Protein sequence | MTTIDLNAGA LAPVADEIDA VDLRVTGALA RELNGVLVRN GPNPLRGRFD GGDVLSWWPQ
DAMLHAISFD DGRATRYRNR WARTRRWARV HDPAREPSLV DTNPNVNVLA HAGEILALAE
GGAPLAITAG LDSIGAARRH PGLAHGMAAH PKVDPHTGEL IAFRADWNRP WLRYLVADAA
GAQTVDTEIA LPAPSMMHDI AITATHSIVF DLNVAYDFSM LSRGHRMPLR WHDARGARIG
VVPRRGGDAR WFDIAPCFIQ HVVNAYDLDR PAIVLDVVRY PWFLRVARDG RGFDDNPPGV
LWRYVIDLVT GTVAEQPLDD AGIELPRIDA RRTGRRHRFL YAAEQPTPVE LRGIVRYDLD
GGSTQRYRVP PGDQNSEPVF VPRPGAAGED DGWLLVCVYR HATDTSDVVI LDGRSIGDGP
IATVHLPRRV PAGFHGAWLP AGA
|
|---|
| |