Gene BMASAVP1_A1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1215 
Symbol 
ID4681217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1198163 
End bp1199224 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content67% 
IMG OID639845488 
ProductABC transporter, periplasmic substrate-binding protein 
Protein accessionYP_992550 
Protein GI121601197 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0399502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTCC GCCGTTCGCT TCTTCCGCGC TCGCCGCTCG CCGCCGTGCG TCGCGCGTGC 
GCCGCCATGC TGATCCCCGT CGCGTCGCTC GCGCTGTCGC TCGGCGCATC CGCCGCGCAC
GCGCAAGACA CCGCGATCTG CTACAACTGC CCGCCCGAAT GGGCCGACTG GGCCGCGCAG
ATCGCCGCGA TCAAGCAGCG GACCGGCATT CGCGTGCCGT TCGACAACAA GAACTCGGGC
CAGGCGATCG CGCAACTGAT CGCCGAGCAG AAGAGCCCCG TCGCGGACGT CGTCTATCTC
GGCGTGTCCT CGGCGTTCCA GGCGAAGGAC AAGGGCGTCG TCGCCCCCTA CAAGCCCGCG
CACTGGAGCG ACATCCCGGC GAATCTCAAG GACCCGCAAG GCTACTGGTT CGCGATCCAC
TCCGGCACGC TCGGCTTCTT CGTCAACAAG GACGCGCTCG ACGGCAAGCC GGTGCCGCGC
ACGTGGGCCG ATCTGCTCAA GCCCGAGTAC AAGGGGATGG TCGGCTATCT CGATCCGTCG
AGCGCGTTCG TCGGCTATGC GGGCGCCGTC GCGGTGAACC AGGCGCTCGG CGGCAGCTTC
GACGATTTCC GCCCGGCGCT CGACTGGTTC CGCAAGCTGA AGGCGAACCA GCCGATCGTG
CCGAAGCAGA CCGCATACGC GCGCGTGCTG TCCGGCGAGA TTCCGATCCT GCTCGACTAC
GATTTCGACG CCTATCGCGC GAAGTACAAG GATCATGCGA ACGTCGAATT CGTGATTCCG
AAGGAAGGCA CGATCTCGGT GCCGTACGTG ATGAGCCTCG TGAAGGGCGC GCCGCACGAG
GCGAACGGCA GGAAGGTGCT CGATTTCGTG CTGTCCGACG AAGGCCAGAA GCTGTGGGCG
AACGCGTATC TGCGGCCGGT GCGCGCGCAG GCGCTCGGCG CCGACGTCGC CGCGCAGTTC
CTGCCGGCGA GCGAGTACGC GCGCGCGAAG AGCGTCGACT TCGGCAAGCT CGCGGCCGGC
CAGCAGGCGT TCGGCAAGCA GTATCTGCAA GCGATGCAAT AA
 
Protein sequence
MTVRRSLLPR SPLAAVRRAC AAMLIPVASL ALSLGASAAH AQDTAICYNC PPEWADWAAQ 
IAAIKQRTGI RVPFDNKNSG QAIAQLIAEQ KSPVADVVYL GVSSAFQAKD KGVVAPYKPA
HWSDIPANLK DPQGYWFAIH SGTLGFFVNK DALDGKPVPR TWADLLKPEY KGMVGYLDPS
SAFVGYAGAV AVNQALGGSF DDFRPALDWF RKLKANQPIV PKQTAYARVL SGEIPILLDY
DFDAYRAKYK DHANVEFVIP KEGTISVPYV MSLVKGAPHE ANGRKVLDFV LSDEGQKLWA
NAYLRPVRAQ ALGADVAAQF LPASEYARAK SVDFGKLAAG QQAFGKQYLQ AMQ