Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1133 |
Symbol | nuoD |
ID | 4680125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1113803 |
End bp | 1115056 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639845407 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_992472 |
Protein GI | 121599344 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.154075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAA TCAAGAACTA CACGCTCAAC TTCGGTCCGC AGCACCCGGC CGCGCACGGC GTGCTGCGCC TCGTGCTCGA GCTCGACGGC GAAGTGATCC AGCGCGCCGA TCCGCACATC GGCCTGCTGC ACCGGGCAAC CGAGAAGCTC GCCGAGAACA AGACGTTCAT CCAGTCCGTG CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTGA ACGAACACGG TTACGTGCTC GCGATCGAGA AGCTGCTCGG CATCGAGGTG CCGGAACGCG CGCAATACAT CCGCGTGCTG TTCGACGAAA TCACGCGCGT GCTGAACCAC CTGATGTGGA TCGGCGCGCA CGCGCTCGAC GTCGGCGCGA TGGCGGTGTT CCTGTATGCG TTCCGCGAGC GCGAGGACCT GATGGACGTG TACGAGGCGG TGTCCGGCGC GCGCATGCAC GCGGCGTACT ATCGTCCGGG CGGCGTCTAT CGCGATCTGC CGGAAGCCAT GCCGCAGTAC AAGGCGTCGA AGATTCGCAA CGAACGTGCG CTCGCGAAGA TGAACGAGGC GCGCTCGGGT TCGGTGCTCG ATTTCATCGA CGATTTCTTC ACGCGCTTTC CGAAGTGCGT CGACGAATAC GAAACGCTGC TGACCGACAA CCGGATCTGG AAGCAGCGTC TCGTGGGCAT CGGCGTCGTG TCGCCGGAGC GCGCGCTGCA GCTCGGCCTG ACGGGGCCGA TGATCCGCGG CTCCGGTATC GCATGGGATC TGCGCAAGAA GCAGCCGTAC GAAGTGTACG ACCGCCTCGA CTTCGATATC CCCGTCGGCG TGAACGGCGA TTGCTACGAC CGCTATCTGG TGCGCGTCGA GGAGATGCGC CAGTCGACGC GTATCGCGAA ACAATGTATT GAGTGGCTTC GCAAGAATCC CGGCCCCGTG ATCACCGACA ATCACAAGGT CGCGCCGCCG TCGCGTGTCG GCATGAAGAC GAACATGGAG GATCTGATCC ACCATTTCAA GCTCTTCACC GAAGGTTTTC ACGTGCCCGA GGGCGAGACG TACGCCGCCG TCGAGCATCC GAAGGGCGAA TTCGGCATCT ATCTGGTGTC GGACGGCGCG AACAAGCCGT ACCGGCTCAA GATTCGTGCG CCGGGCTACG CCCATCTGTC CGCGCTCGAC GAAATGGCGC GCGGGCACAT GATCGCCGAC GCCGTCACGA TCATCGGGAC GCAGGACATC GTGTTCGGCG AAATCGACCG CTGA
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Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AENKTFIQSV PYMDRLDYVS MMVNEHGYVL AIEKLLGIEV PERAQYIRVL FDEITRVLNH LMWIGAHALD VGAMAVFLYA FREREDLMDV YEAVSGARMH AAYYRPGGVY RDLPEAMPQY KASKIRNERA LAKMNEARSG SVLDFIDDFF TRFPKCVDEY ETLLTDNRIW KQRLVGIGVV SPERALQLGL TGPMIRGSGI AWDLRKKQPY EVYDRLDFDI PVGVNGDCYD RYLVRVEEMR QSTRIAKQCI EWLRKNPGPV ITDNHKVAPP SRVGMKTNME DLIHHFKLFT EGFHVPEGET YAAVEHPKGE FGIYLVSDGA NKPYRLKIRA PGYAHLSALD EMARGHMIAD AVTIIGTQDI VFGEIDR
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