Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1073 |
Symbol | hemF |
ID | 4681476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1055800 |
End bp | 1056723 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639845347 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_992413 |
Protein GI | 121598643 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.828058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATT CGACTTACGA CGTCAACCGA GTACGCGCTT ACCTGCAAGG GCTGCAGATG CGCATCGCCG ATGCGCTCGG CGCCTTCGAC GGCACGCCGC TCGCCGCCGA CACGTGGCGG CGCGGCCCCG GCGAGCGGCT GCGCGGCGGC GGCTGCACGC GCATTCTCGA GGCAGGCGGC TTCTTCGAGC GCGCGGGCAT CGGCTTTTCC GACGTCGCGG GCGACGCGCT GCCGCCGTCG GCGAACGCAT CGCGCCCGCA GCTCGCCGGG CGCGGCTTCG AGGCGCTCGG CGTATCGCTC GTGCTGCACC CGCGCAATCC GTACTGCCCG ACCGTCCACA TGAACGTGCG GATGCTGATC GCGACGAAGC CGGGCGAGGC GCCCGTGTTC TGGTTCGGCG GCGGCATGGA TCTGACGCCG ATTTACGGCT TCGAAGAGGA TGCACGGCAC TTCCACCGCA CGTGCCGCGC GGCGCTCGAG CCGTTCGGCG CCGAGCTGTA CCCGCGCTTC AAGAAATGGT GCGACGACTA TTTCTTCCTG AAACATCGCA ACGAGGCGCG CGGGATCGGC GGCATCTTCT TCGACGACTT CTCCGAGCTC GGCTTCGAAC GCTCGTTCGA GATGCTGCAA AGCGTCGGCG ACGCGTTCCT GCCGTCGTAC CTGCCGATCG TCGAGCGCCG CCGCGACACG CCGTACGGCG AGCGCGAGCG CGCGTTCCAG GCATACCGGC GCGGCCGCTA CGTCGAGTTC AACCTGGTGT TCGACCGCGG CACGCTGTTC GGGCTGCAAA GCGGCGGGCG CACCGAGTCC ATCCTGCTGT CGATGCCGCC GACGGCGGGC TGGCGCTATG ACTGGCATCC GGACCCGGGC ACGCCCGAAG CACGCCTGCA AAGCGAGTTC CTCGTGCCGC GCGACTGGGC ATGA
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Protein sequence | MTDSTYDVNR VRAYLQGLQM RIADALGAFD GTPLAADTWR RGPGERLRGG GCTRILEAGG FFERAGIGFS DVAGDALPPS ANASRPQLAG RGFEALGVSL VLHPRNPYCP TVHMNVRMLI ATKPGEAPVF WFGGGMDLTP IYGFEEDARH FHRTCRAALE PFGAELYPRF KKWCDDYFFL KHRNEARGIG GIFFDDFSEL GFERSFEMLQ SVGDAFLPSY LPIVERRRDT PYGERERAFQ AYRRGRYVEF NLVFDRGTLF GLQSGGRTES ILLSMPPTAG WRYDWHPDPG TPEARLQSEF LVPRDWA
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