| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0968 |
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| Symbol | |
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| ID | 4679208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 959945 |
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| End bp | 961318 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639845242 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_992308 |
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| Protein GI | 121600107 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.028238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCG ACTCCGGACT GCCGTTCCCG CAACGCTACT GGGCGATCGT CTGCGTCGCG
CTGGGCATCA CGCTCGCCGT GCTCGACGGC GCGATCGCGA ACGTCGCGCT GCCGACGATC
GCCCGCGATC TGCGCGCCTC CGACGCCGCG TCGATCTGGA TCGTCAACGC GTACCAACTC
GCCGTCACGA TCTCGCTGCT GCCGCTCGCC TCGCTCGGGG ACCGCATCGG CTACCGGCGC
GTCTACATCG CGGGGCTCAT GCTCTTCACG GCGGCGTCGC TCGGCTGCGC GCTGTCGGGC
ACGCTGCCCG CGCTCGCGAC GCTGCGCGTG ATCCAGGGCT TCGGCGCGGC CGGCATCATG
AGCGTGAATA CCGCGCTCGT GCGGATGATC TATCCGTCTT CGCAACTCGG GCGCGGCGTC
GCGATCAACG CAATGGTCGT CGCACTGTCG TCGGCGGTCG GGCCGACCGT CGCGTCCGCG
GTGCTCGCCG TCGCGCCGTG GCCGTGGCTC TTCGCGATCA ACGTGCCGAT CGGCGTCGCC
GCCGTGTGCG GCAGCCTGCG CGCGCTGCCG GCGAATCCGG GCCGCAGCGC GCCGTACGAT
TTCATCGGCG CCGTGATGAA CGCCTGCGTG TTCGGGCTGT TGATCGTGTC CGTCGACGGG
CTCGGCCACG GCGGGAATCG CGCGAGCGTC GCGCTCACCG CGCTCGTGGC CGCCGTGATC
GGCTACTTCT TCGTCAAGCG CCAGTTGACG CAGCCCGCGC CGCTGTTGCC CGTCGACCTG
ATGCGCGTTC CGATCTTCGC GCTGTCGATC GGCACATCGG TCGCGTCGTT CACATCGCAG
ATGCTCGCGT TCGTCGCGCT GCCGTTCTGG CTACAGAACA CGCTCGGCTT CTCGCAGGTC
CAGACGGGGC TCTACATGAC GCCGTGGCCG CTCGTGATCG TCGTCGCGGC GCCGCTCGCG
GGCGTGCTGT CCGACCGCTA TTCGGCGGGC GCGCTGGGCG GCATCGGCCT CGCCCTGTTC
GCATCCGGCC TGTTCGCGCT CGCGACGATC GGTGCGCACC CGACGCCCGT CGACATCATG
TGGCGGATGG CGCTGTGCGG CGCGGGCTTC GGGCTCTTCC AGTCGCCGAA CAACCGCGCG
ATCCTGTCGT CCGCGCCGCG CGAGCGCGCG GGCGGCGCAA GCGGGATGCT CGGCACCGCC
CGGCTCACCG GACAAACGCT CGGCGCCGCG CTCGTCGCGC TGATCTTCGG CATCGCGCCG
CAGCACGGGC CGACGATCGC GCTCTACGCG GCGAGCTCGT TCGCCGCCGT CGCGGCGGCC
GTGAGCCTGC TGAGAATCCG CGCGCGGCGC GATACGACCG CCGCAGCGGG TTGA
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| Protein sequence | MNADSGLPFP QRYWAIVCVA LGITLAVLDG AIANVALPTI ARDLRASDAA SIWIVNAYQL
AVTISLLPLA SLGDRIGYRR VYIAGLMLFT AASLGCALSG TLPALATLRV IQGFGAAGIM
SVNTALVRMI YPSSQLGRGV AINAMVVALS SAVGPTVASA VLAVAPWPWL FAINVPIGVA
AVCGSLRALP ANPGRSAPYD FIGAVMNACV FGLLIVSVDG LGHGGNRASV ALTALVAAVI
GYFFVKRQLT QPAPLLPVDL MRVPIFALSI GTSVASFTSQ MLAFVALPFW LQNTLGFSQV
QTGLYMTPWP LVIVVAAPLA GVLSDRYSAG ALGGIGLALF ASGLFALATI GAHPTPVDIM
WRMALCGAGF GLFQSPNNRA ILSSAPRERA GGASGMLGTA RLTGQTLGAA LVALIFGIAP
QHGPTIALYA ASSFAAVAAA VSLLRIRARR DTTAAAG
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