Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0928 |
Symbol | |
ID | 4679803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 922167 |
End bp | 923582 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639845202 |
Product | putative lipopolysaccharide ABC transporter, ATP-binding protein |
Protein accession | YP_992268 |
Protein GI | 121599624 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGATGT CCTCTGAATT GCCGGCAATC AGCGTCCAAG ACGTCAGCAA GCGCTTTCGC GTATTTGCCA AGCCGGCAGA CCGTCTGAAG GCCGCAGTTC GGCATCGCAT CGGCGGTCTC GCGAAGTTGG TGCCCGCTCG TTTGCTCGGA ACGGAAGGTG CAAGCGAGTT TCATGCGCTG CAGCATGTGT CGTTTCACGT ACAAAAGGGC GAGACGATCG GAATCATCGG CCGCAACGGC TCGGGAAAGT CGACGTTGTT GCAGATCATC TGCGGGACGC TCACGCCGTC GGGTGGCCGG GTTGCGATCA ACGGGCGCGT CGCCGCGCTG CTCGAACTCG GAGCGGGCTT CAATCCGGAG TTCACTGGCC GCGAAAACGT ATACATGAAC GCGGCGTTGC TGGGCCTCTC GAAAGCCCAG ATCGAGGAGC GGCTCGACGC CATCTTCGCT TTTGCCGATA TTGGCGGCTT CGTGGATCAA CCGGTGAAGA CCTATTCGAG CGGCATGTAC GTGCGGCTTG CTTTTGCCGT CATTGCGCAC GTCGACGCCG ACGTGCTCGT GATCGACGAA GCGTTGGCCG TCGGGGACGC ATTCTTCACG CAAAAGTGCA TGCGTTTTCT GCGCGCGTTC ATGGAGCGGG GCACCGTTTT ATTTGTCAGC CACGATACGA ACGCGGTGGT CAATCTCTGT ACCCGCGTCG TATGGCTTGA CAAGGGGCGC GTTCGCGAAA TCGGTCCGGC AAAGGACGTT TGCGACTCGT ATCTTGAGGC TTTCTACGAG GAGCAGCATT GCGCATCGGG GCGAAGCGTT CGCGCGCTTG AGCGCAGCAG TGTCGTGCGC GCAATAGCCG AAGGCGATAT GCGCGACCAG CGCGCATTGC TCATCAACGC GTCGAAGCTG CGCAACGACG TGGAGTTGTT CCAGTTCACT GCCGACGCGA AGAATTTCGG TCTTGGCGGC GCATCGATTG AGCATGTCGG CATCGAGGAT GGCACGGGGG CGCCGCTGAA TTGGGTAGTG GGAGGCGAGA TCGTTTGCAT CCGCATCGCC GTCAAAGCCC TGCAGAACCT GGAGCGTGCC ATCGTCGGAT TCATTGTCCG GGATCGGCTC GGGCAAAATC TGTTTGGCGA CAACACGTAT CTCACGACCC TCAACGAGCC GTTCGCTGTC GCGGCGGGCG AAAGTTTTTC GGTCCGATTC GGGTTCAGAA TGCCGGTCTT GCCGGTAGGC GATTATTCGG TGACGGTTGC AGTCGCCGAC GGTTCACAAA GCGACCACGT GATCCACCAA TGGCTGCACG ATGCGGTGTT GTTGAAGTCG CATTCGACGA GTGTCAGTAC AGGATTAATA GGTATTCCAA TGCATGAGAT CGTGCTTGAG CGGGATACGC TGAACGAAGT TGGGGCGGCG CAATGA
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Protein sequence | MPMSSELPAI SVQDVSKRFR VFAKPADRLK AAVRHRIGGL AKLVPARLLG TEGASEFHAL QHVSFHVQKG ETIGIIGRNG SGKSTLLQII CGTLTPSGGR VAINGRVAAL LELGAGFNPE FTGRENVYMN AALLGLSKAQ IEERLDAIFA FADIGGFVDQ PVKTYSSGMY VRLAFAVIAH VDADVLVIDE ALAVGDAFFT QKCMRFLRAF MERGTVLFVS HDTNAVVNLC TRVVWLDKGR VREIGPAKDV CDSYLEAFYE EQHCASGRSV RALERSSVVR AIAEGDMRDQ RALLINASKL RNDVELFQFT ADAKNFGLGG ASIEHVGIED GTGAPLNWVV GGEIVCIRIA VKALQNLERA IVGFIVRDRL GQNLFGDNTY LTTLNEPFAV AAGESFSVRF GFRMPVLPVG DYSVTVAVAD GSQSDHVIHQ WLHDAVLLKS HSTSVSTGLI GIPMHEIVLE RDTLNEVGAA Q
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