Gene BMASAVP1_A0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0925 
SymbolrfbC 
ID4681179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp920053 
End bp920430 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content57% 
IMG OID639845199 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_992265 
Protein GI121600544 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTCGCG GCCTGCACTA TCAAATTCAG CACGCGCAAG GGAAACTCGT GCGTGTAGTC 
GACGGCGAAG TGTTCGACGT CGCGGTCGAT GTCCGGAGGA GTTCGCCCAA TTTCGGTAAG 
TGGGTTGGCG TACGGCTGTC TGCGGAGAAC AAGCGGCAGC TTTGGGTGCC GGCGGGCTTC 
GCGCATGGCT TCGTTGTACT GAGCGAATCA GCGGATTTTC TGTACAAGAC GACCGACTAT 
TGGTATCCGG AGTTTGAGCG GAGCATCCTT TGGAGCGACA AGCAAATCGG TATCGAATGG 
CCGATTGATC GGGAGCCGCT TGTTGCTGCA AAGGATGCCG CGGGCAAGGC GATTAGCGAA 
GCCGAGGTCT ATGCATGA
 
Protein sequence
MLRGLHYQIQ HAQGKLVRVV DGEVFDVAVD VRRSSPNFGK WVGVRLSAEN KRQLWVPAGF 
AHGFVVLSES ADFLYKTTDY WYPEFERSIL WSDKQIGIEW PIDREPLVAA KDAAGKAISE 
AEVYA