Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0556 |
Symbol | |
ID | 4681971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 566984 |
End bp | 568423 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639844833 |
Product | DHA2 family drug:H+ antiporter-1 |
Protein accession | YP_991905 |
Protein GI | 121600517 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.601964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCCAG CCCCGCCCGC CGCCGCCCCG AGCGAGAAAT CGTTGACCGT GATGCTGTGG CTCGTCGCCA CCGGCTTCTT CATGCAAACG CTCGACGCGA CGATCGTCAA CACCGCGCTG CCCTCGATGG CCGCGAGCCT CGGTGAATCG CCGCTCAGGA TGCAGTCGGT CGTGATCGCG TACTCGCTGA CGATGGCCGT GATGATCCCC GTATCCGGCT GGCTCGCCGA TACGCTCGGC ACGCGCCGCG TGTTCTTCAG CGCGATCCTG ATCTTCACGC TCGGCTCGCT CCTGTGCGCG AACGCGCACA CGCTGCCGCT TCTCGTCGCG TTCCGCGTGA TCCAGGGCGT GGGCGGCGCG ATGCTGCTGC CCGTCGGGCG GCTCGCGGTG CTGCGCACGT TCCCCGCCGA GCGCTATCTG CCCGCGCTGT CGTTCGTCGC GATCCCGGGC CTGATCGGCC CGCTGATCGG GCCGACGCTC GGCGGCTGGC TCGTGAAGAT CGCATCGTGG CACTGGATTT TCCTCATCAA CGTGCCGGTC GGCATCGCCG GCTGCATCGC GACGTTCTAC TCGATGCCCG ACTCGCGCAA TCCGGCAGCG GGGCGCTTCG ATCTGAAGGG CTATCTGCTG CTGACGATCG GGATGATCGC GATCTCGCTG TCGCTCGACG GCCTCGCCGA TCTCGGCATG CAGCACGCGA TGGTGCTCGT GCTGCTGATC CTGAGTCTCG CGTGCTTCGT CGCGTATGGC CTGTACGCGG TGCGCGCGCC GCAGCCGATC TTCTCGCTCG AGCTCTTTGG GATCCACACG TTCAGCGTGG GCCTGCTCGG CAACCTGTTC GCGCGGATCG GCAGCGGCGC GATGCCGTAT CTGATTCCGC TGCTGCTGCA GGTGAGCCTC GGCTACGGCG CGTTCGAGGC GGGCCTGATG ATGCTGCCCG TCGCGGCTGC CGGAATGTTC TCGAAACGGA TCATCACGGT GCTCATCACG CGCCACGGCT ACCGCAAGGT GCTGCTCGCG AACACGATCA TGGTCGGGCT GATGATGGCG AGCTTCGCGC TCGTGAGCGA CGCGATGCCG ACCTGGCTGA AGATCGCGCA GCTCGCGCTG TTCGGCGGCT TCAACTCGAT GCAGTTCACC GCGATGAACA CCCTCACGCT GAAGGACCTC GGCACGGGCG GCGCGAGTAG CGGCAACAGC CTGTTCTCGC TCGTGCAGAT GCTGTCGATG AGCCTCGGCG TGACGGTGGC GGGCGCGCTG CTCGCGACCT TCACCGGCAT GATGCGCAGC GTCACGCCGA CGCACACGCT GCCCGCGTTT CATGCGACGT TCGTGTGCGT CGGCCTCATC ACCGCCGCGT CGGCCTGGAT CTTCGCGCAA CTGTCGCCCG ACGTGCGCGG CGCCGTGCGA CGCAAGACCG ATCCGTCCGA GCGCGCGTGA
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Protein sequence | MPPAPPAAAP SEKSLTVMLW LVATGFFMQT LDATIVNTAL PSMAASLGES PLRMQSVVIA YSLTMAVMIP VSGWLADTLG TRRVFFSAIL IFTLGSLLCA NAHTLPLLVA FRVIQGVGGA MLLPVGRLAV LRTFPAERYL PALSFVAIPG LIGPLIGPTL GGWLVKIASW HWIFLINVPV GIAGCIATFY SMPDSRNPAA GRFDLKGYLL LTIGMIAISL SLDGLADLGM QHAMVLVLLI LSLACFVAYG LYAVRAPQPI FSLELFGIHT FSVGLLGNLF ARIGSGAMPY LIPLLLQVSL GYGAFEAGLM MLPVAAAGMF SKRIITVLIT RHGYRKVLLA NTIMVGLMMA SFALVSDAMP TWLKIAQLAL FGGFNSMQFT AMNTLTLKDL GTGGASSGNS LFSLVQMLSM SLGVTVAGAL LATFTGMMRS VTPTHTLPAF HATFVCVGLI TAASAWIFAQ LSPDVRGAVR RKTDPSERA
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