| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0462 |
|---|
| Symbol | secA |
|---|
| ID | 4681270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 453233 |
|---|
| End bp | 456028 |
|---|
| Gene Length | 2796 bp |
|---|
| Protein Length | 931 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639844739 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_991811 |
|---|
| Protein GI | 121600427 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.125035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG GTTTTCTTCA GAAAATTTTT GGCAGCCGCA ATCAGCGGCT CGTCAAGCAA
TACCAAAAGA CCGTCGCGGC GATCAATGCG CTTGAAACGC AGATCGAGAC GCTGACGGAC
GACCAGTTGC GCGGCAAGAC AGGGGAGTTC CGTCAGCGCA TCGCGGCCGG CGAGTCGCTC
GACAAGCTCC TGCCCGAGGC GTTCGCCGTG TGCCGCGAGG CGAGCCGCCG CGTGCTGAAG
ATGCGCCACT TCGACGTGCA GATGATCGGC GGGATGGTGC TGCATTACGG CAAGATCGCC
GAAATGCGCA CGGGCGAGGG CAAGACGCTC GTCGCGACGC TCGCCGCGTA CCTGAACGCG
CTCGCCGGCC GCGGCGTGCA CGTCGTGACG GTCAACGATT ACCTCGCGCA GCGCGACGCC
GAGTGGATGG GCCGGCTCTA CAACTTCCTC GGGCTTTCGG TCGGCATCAA CCTCTCGGGG
ATGGAGCACG ACCAGAAGCA GGCGGCGTAC GCAGCCGACA TCACGTACGG CACGAACAAC
GAATTCGGTT TCGACTACCT GCGCGACAAC ATGGTCTACG AGACCGATTC GCGCGTGCAG
CGGCCGCTGA ATTTCGCGGT GGTCGACGAA GTCGACTCGA TCCTGATCGA CGAAGCGCGC
ACGCCGCTCA TCATCTCGGG CCAGGCTGAG GATCACACCG AGCTGTACGT GCGGATGAAC
GCGCTGCCGC CGCTGCTCGA GCGCCAGATC GGCGAGGAGA AGGCGGACGG CACGGGCGTC
GAGAAGCCGG GCGACTACAC GCTCGACGAG AAGGGCCGCC AGGTGTTCCT GACCGAGTCG
GGCCATGAGA AGGCCGAGCG GATGCTCGCC GAATGGGGCT TGATCGGCGA CGGCGAGAGC
CTCTACGCGC CGCAGAACAT CACGCTGATG CACCATGTGT ACGCGGCGCT GCGCGCGCAC
ACGCTGTTCC ATCGCGATCA GCACTACGTC GTGCAGAACG ACGAGGTGAT CATCGTCGAC
GAATTCACGG GCCGCCTGAT GCCGGGCCGC CGCTGGTCCG ACGGCCTGCA CCAGGCGGTC
GAGGCGAAGG AGCACGTGAA GATCCAGAGC GAGAACCAGA CGCTCGCGTC GATCACGTTC
CAGAACTACT TCCGGATGTA CGCGAAGCTC TCGGGCATGA CGGGCACGGC GGACACCGAG
GCGTACGAAT TCAACGAGAT CTACGGCCTC GAGACGGTCG TGATCCCGAC CAACCGGCCG
CCGAAGCGGA TCGACAAGCA GGATCAGATC TACAAGACCG CGAAGGAGCG CTACGACGCG
GTGATCCGCG ACATCCGCGA GTGCCACGAG CGCGGCCAGC CCGTGCTCGT CGGCACGACG
TCGATCGAGA ACTCGGAGCT GCTGTCGCAC CTGCTCAAGC AGGCGGGCCT GCCTCACGAG
GTGCTGAACG CGAAGCAGCA CGCGCGCGAA GCGGCGATCG TCGCCGAGGC GGGCCGGCCG
AAGCGCATCA CGATCGCGAC GAACATGGCG GGCCGCGGCA CCGATATCGT GCTCGGCGGC
AACGTCGAGA AGCAGGCGGC GTTCATCGAG GCCGACGAAT CGATTCCGGC CGACGAGAAG
GCGCGCCGCA TCCAGCAACT GCACGACGAG TGGGAAACGC TGCACGAGCA GGTGAAGACC
GCGGGCGGCC TGCACATCAT CGGCACCGAG CGCCACGAGT CGCGCCGGAT CGACAATCAG
TTGCGCGGCC GCGCGGGCCG TCAGGGCGAT CCGGGCTCGT CGCGCTTCTA CCTGTCGCTC
GAGGATCCGC TGTTGCGCAT CTTCGCGGGC GACCGCGTGC GCGCGATCAT GGACCGCCTG
AAGATGCCGG AGGGCGAGGC GATCGAAGCG GGCATCGTCA CGCGTTCGAT CGAGTCCGCG
CAACGCAAGG TCGAAGCGCG CAACTTCGAT ATCCGCAAGC AGCTGCTCGA ATACGACGAC
GTGTCGAACG ATCAGCGCAA GGTGATCTAC CAGCAGCGCA ACGAGCTGCT CGAAGCGCAC
GACATCGCCG AAACGATCGG CGCGATGCGT CACGGCGTGA TCTCGGAAGT CGTTCGCCAG
TTCGTGCCGG CGGGCAGCAT CGAGGAGCAG TGGGATCTGC CCGAGCTCGA AGAGACGCTG
CGCAACGATT GGCAGCTGGA CCTCGCGATC CAGGAAATGG TGAACGAGTC GTCGTCGATC
AACGCGGACG AGATCCTCGA CGCCGTCACG ACGGCCGCCG ACGAACACTA TGAAGCGAAG
GTCGCGCTGG TCGGCCGCGA ATCGTTCAGC GCGTTCGAGC GCTCGATCAT GCTGCAGACG
CTCGACCGGC TGTGGCGCGA GCACCTCGCG GCGCTCGATC ATCTGCGTCA GGGCATTCAT
CTGCGCGGCT ATGCGCAGAA GAACCCGAAG CAGGAATACA AGCGCGAGGC GTTCGAACTG
TTCGCGGCGA TGCTCGATGC GGTGAAGCAG GAAGTCACGC GGATCGTGAT GAACGTGCAG
ATCCAGTCGC CCGAGCAGCT CGAGGAGGCA GCCGAGCAGA TCGAGGAGCA GGGCGGCCAG
CTCGGCAACG TCGAGTTCCA GCACGCCGAT TTCGCGGCGG CGGCGGCCGC GGCGACGGCG
GGCGGCGCGG TGGTCGCGGA TGCGACGGCC GAGATGGTTG GCCACGCGAT GAGCCACAGC
GGCCCGGCGG GCGAAGTGCC GCGAGTCGGC CGCAACGATC CGTGCCCGTG CGGCAGCGGC
AAGAAGTACA AGCACTGTCA CGGCAAGCTG AACTGA
|
|---|
| Protein sequence | MTTGFLQKIF GSRNQRLVKQ YQKTVAAINA LETQIETLTD DQLRGKTGEF RQRIAAGESL
DKLLPEAFAV CREASRRVLK MRHFDVQMIG GMVLHYGKIA EMRTGEGKTL VATLAAYLNA
LAGRGVHVVT VNDYLAQRDA EWMGRLYNFL GLSVGINLSG MEHDQKQAAY AADITYGTNN
EFGFDYLRDN MVYETDSRVQ RPLNFAVVDE VDSILIDEAR TPLIISGQAE DHTELYVRMN
ALPPLLERQI GEEKADGTGV EKPGDYTLDE KGRQVFLTES GHEKAERMLA EWGLIGDGES
LYAPQNITLM HHVYAALRAH TLFHRDQHYV VQNDEVIIVD EFTGRLMPGR RWSDGLHQAV
EAKEHVKIQS ENQTLASITF QNYFRMYAKL SGMTGTADTE AYEFNEIYGL ETVVIPTNRP
PKRIDKQDQI YKTAKERYDA VIRDIRECHE RGQPVLVGTT SIENSELLSH LLKQAGLPHE
VLNAKQHARE AAIVAEAGRP KRITIATNMA GRGTDIVLGG NVEKQAAFIE ADESIPADEK
ARRIQQLHDE WETLHEQVKT AGGLHIIGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL
EDPLLRIFAG DRVRAIMDRL KMPEGEAIEA GIVTRSIESA QRKVEARNFD IRKQLLEYDD
VSNDQRKVIY QQRNELLEAH DIAETIGAMR HGVISEVVRQ FVPAGSIEEQ WDLPELEETL
RNDWQLDLAI QEMVNESSSI NADEILDAVT TAADEHYEAK VALVGRESFS AFERSIMLQT
LDRLWREHLA ALDHLRQGIH LRGYAQKNPK QEYKREAFEL FAAMLDAVKQ EVTRIVMNVQ
IQSPEQLEEA AEQIEEQGGQ LGNVEFQHAD FAAAAAAATA GGAVVADATA EMVGHAMSHS
GPAGEVPRVG RNDPCPCGSG KKYKHCHGKL N
|
|---|
| |