Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0324 |
Symbol | |
ID | 4679025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 324229 |
End bp | 324912 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639844602 |
Product | phosphonates-binding periplasmic protein |
Protein accession | YP_991675 |
Protein GI | 121598507 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein [TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.425891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTGA TCCGCTCCCT CGTCGCCTGC GTGGCCGCGC TCGCGTGCGC CGCCGCCGCT CATGCGCAAA CGCTGAACTT CGGCATCATC TCCACCGATT CGTCGGCGGT GCTCAAGCGC CGCTGGCAAC CGCTCATCGA CGACATGAAC CGCAAGACGG GCCTCGACGT GAAGGCGTTC TTCGCGACCG ACTACGCGGG CATCATCGAG GGCATGCGCT TCAACAAGGT ACAGCTCGGC TACTTCGGCA ACGCGTCGGC GCTCGAGGCG GTCGAGCGCT CGAACGGCGA GGTGTTCGCG AAGCTTCGCC ACGCGAACGG CGAGACCGGC TACTACTCGG TGCTGATCAC GAACGCGAAC AGCCGCTTCA GGACGCTTGA CGACGTGTTC AGGAACCCGA AGGACGTGAC GCTCGGCTTC GGCGATCCGA ACTCGACGTC CGGCACGCTC GTGCCCGCGT ACTATCTGTT CGCGCCGCGC GGCATAGCGC CGCGCACCGC GTTCAGGACG GTGCTGCCGT CGAGCCACGA GGGCAATCTG CTCGCGGTCG TCAACGACAA GATCGACATC GCGACGAACA ACACCGACGT GCTCGGCATG CTGAAGAAGC AGCATCCGGA TCAATACGCG CGGGTGCGCG TGCTGTGGAC ATCGCCGCAG ATCGCATCCG ATCCGCTCGT GTAG
|
Protein sequence | MKLIRSLVAC VAALACAAAA HAQTLNFGII STDSSAVLKR RWQPLIDDMN RKTGLDVKAF FATDYAGIIE GMRFNKVQLG YFGNASALEA VERSNGEVFA KLRHANGETG YYSVLITNAN SRFRTLDDVF RNPKDVTLGF GDPNSTSGTL VPAYYLFAPR GIAPRTAFRT VLPSSHEGNL LAVVNDKIDI ATNNTDVLGM LKKQHPDQYA RVRVLWTSPQ IASDPLV
|
| |