Gene BMASAVP1_A0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0324 
Symbol 
ID4679025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp324229 
End bp324912 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID639844602 
Productphosphonates-binding periplasmic protein 
Protein accessionYP_991675 
Protein GI121598507 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.425891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGA TCCGCTCCCT CGTCGCCTGC GTGGCCGCGC TCGCGTGCGC CGCCGCCGCT 
CATGCGCAAA CGCTGAACTT CGGCATCATC TCCACCGATT CGTCGGCGGT GCTCAAGCGC
CGCTGGCAAC CGCTCATCGA CGACATGAAC CGCAAGACGG GCCTCGACGT GAAGGCGTTC
TTCGCGACCG ACTACGCGGG CATCATCGAG GGCATGCGCT TCAACAAGGT ACAGCTCGGC
TACTTCGGCA ACGCGTCGGC GCTCGAGGCG GTCGAGCGCT CGAACGGCGA GGTGTTCGCG
AAGCTTCGCC ACGCGAACGG CGAGACCGGC TACTACTCGG TGCTGATCAC GAACGCGAAC
AGCCGCTTCA GGACGCTTGA CGACGTGTTC AGGAACCCGA AGGACGTGAC GCTCGGCTTC
GGCGATCCGA ACTCGACGTC CGGCACGCTC GTGCCCGCGT ACTATCTGTT CGCGCCGCGC
GGCATAGCGC CGCGCACCGC GTTCAGGACG GTGCTGCCGT CGAGCCACGA GGGCAATCTG
CTCGCGGTCG TCAACGACAA GATCGACATC GCGACGAACA ACACCGACGT GCTCGGCATG
CTGAAGAAGC AGCATCCGGA TCAATACGCG CGGGTGCGCG TGCTGTGGAC ATCGCCGCAG
ATCGCATCCG ATCCGCTCGT GTAG
 
Protein sequence
MKLIRSLVAC VAALACAAAA HAQTLNFGII STDSSAVLKR RWQPLIDDMN RKTGLDVKAF 
FATDYAGIIE GMRFNKVQLG YFGNASALEA VERSNGEVFA KLRHANGETG YYSVLITNAN
SRFRTLDDVF RNPKDVTLGF GDPNSTSGTL VPAYYLFAPR GIAPRTAFRT VLPSSHEGNL
LAVVNDKIDI ATNNTDVLGM LKKQHPDQYA RVRVLWTSPQ IASDPLV