Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0300 |
Symbol | secF |
ID | 4678985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 298141 |
End bp | 299082 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639844578 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_991651 |
Protein GI | 121601113 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGTT GGTCTTCAAC GTGGTCTCGC TCGTGACGTT CCTCTCCGCC GTGTTCTTCC TGTTCCATCG CGGGCTGCAT CTGTCCGTCG AATTCACGGG CGGCACCGTG ATCGAAGTGC AGTACCAGCA GGCCGCGCAG CTCGAACCCG TGCGCGCGAC GCTCGGCTAC GCCGACTCGC AGGTGCAGAA CTTCGGCACG TCGCGCAACG TGCTGATTCG CCTGCCGCTC AAGCAGGGCC TCACGTCCGC GCAGCAGAGC GACCAGGTGA TGGCCGCGCT GAAGGCGCAG AACGCCGACG TCGCGCTGCA GCGCGTCGAG TTCGTCGGCC CGCAGGTCGG CCGCGAGCTC GCGACCGACG GCCTGCTCGC GCTCGCGTGC GTCGTGATCG GCATCGTCAT CTATCTGTCG TTCCGCTTCG AATGGAAGTA CGCGGTCGCC GGCATCATCG CGAACCTGCA CGACGTCGTG ATCATTCTCG GCTTCTTCGC GTTCTTCCAG TGGGAGTTCT CGCTGTCGGT GCTGGCGGCG GTGCTCGCGG TGCTCGGCTA CTCGGTCAAC GAATCGGTCG TCATCTTCGA CCGGATCCGC GAGACGTTCC GCCGCGAGCG CAAGATGACG GTGCAGGAAG TGATCAACCA TGCGATCACG AGCACGATGT CGCGCACGAT CATCACGCAC ACGTCGACGG AAATGATGGT GCTGTCGATG TTCTTCTTCG GCGGCCCGAC GCTGCACTAC TTCGCGCTCG CGCTGACGGT CGGCATCATG TTCGGCATCT ATTCGTCGGT GTTCGTCGCC GGCTCGCTCG CGATGTGGCT CGGCATCAAA CGCGAGGATC TCGTCAAGGA GAAGAAGTCC GCGCACGATC CGAACGATCC GAACGCGGGC GCGCAGGTGT AA
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Protein sequence | MEFFRIRKDI PFMRHALVFN VVSLVTFLSA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAQ LEPVRATLGY ADSQVQNFGT SRNVLIRLPL KQGLTSAQQS DQVMAALKAQ NADVALQRVE FVGPQVGREL ATDGLLALAC VVIGIVIYLS FRFEWKYAVA GIIANLHDVV IILGFFAFFQ WEFSLSVLAA VLAVLGYSVN ESVVIFDRIR ETFRRERKMT VQEVINHAIT STMSRTIITH TSTEMMVLSM FFFGGPTLHY FALALTVGIM FGIYSSVFVA GSLAMWLGIK REDLVKEKKS AHDPNDPNAG AQV
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