Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0178 |
Symbol | secB |
ID | 4681088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 182874 |
End bp | 183353 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639844456 |
Product | preprotein translocase subunit SecB |
Protein accession | YP_991529 |
Protein GI | 121598772 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1952] Preprotein translocase subunit SecB |
TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGACG TCGAAAACCA ACCGTTCTTC AACATCCAGC GCATCTACCT GAAGGACCTG TCGCTCGAGC AGCCGAATTC GCCCGCGATC TTCCTCGAGC AGGAGATGCC CGCCGTTGAA GTCGAGGTCG ACGTGAAGGC CGAACGCCTT GCCGAGAACG TCTACGAGAT CGTCGTCGCG GGCACCGTCA CCGCGAAGGT GCGCGAGAAG GTCGCGTTCC TCGTCGAAGC GAAGCAGGCC GGCATTTTCG ACATCCGCAA CATCCCGGCC GAGCAGATCG ATCCGCTGTG CGGCATCGCG TGCCCGACGA TCCTGTTTCC GTACCTGCGC TCGAACATCG CCGATTCGAT CACCCGCGCG GGCTTCCCGC CGATCCACCT CGCCGAGATC AACTTCCAGG CGCTGTACGA GCAGCGCCTC GCCGAAATCT CGCAGCAACA ACAGCAAGGC GGCGCGCCGA ACGGCACGAC GCTGAACTGA
|
Protein sequence | MSDVENQPFF NIQRIYLKDL SLEQPNSPAI FLEQEMPAVE VEVDVKAERL AENVYEIVVA GTVTAKVREK VAFLVEAKQA GIFDIRNIPA EQIDPLCGIA CPTILFPYLR SNIADSITRA GFPPIHLAEI NFQALYEQRL AEISQQQQQG GAPNGTTLN
|
| |