Gene BMASAVP1_A0100 details

Gene Information

• Locus tag: BMASAVP1_A0100
• Symbol: nirD-1
• ID: 4681019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 98812
• End bp: 99276
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639844378
• Product: nitrite reductase [NAD(P)H], small subunit
• Protein accession: YP_991451
• Protein GI: 121599396
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGATGC GTGACGCGTC GCGCATCGCG CCGCCCGCGC GCCCCGTCAA TCACCCAGGA 
ATCCGAATCA TGTCCGCCAC CCAACCCGAA TGGATCGCCG TCTGCCGACT GGACGACATC 
CCGCCGCTCG GCGCACGCGT CCTCACGCGC GAGGCCGGCA TGCCGATCGC CCTCTTTCGC 
ACCGCGAGCG ACGCGGTGTT CGCGCTCCTC GACCGCTGCC CGCACAAGGG CGGCCCGCTG 
TCGCAGGGGA TCGTTCACGG CGAGCAGGTC ACGTGTCCGC TGCACGGCTT CAATGTCGCG 
TTCTCGAGCG GCTGCGCGCT GCCGCCCGAC GAAGGCTGCA CGAGCGTCTT CAGCGTGAAG 
CGCGACGGCG ACACGGTGCT GCTCGAGCGC ACCGAGCTCG CGACGCTCGG CGTCGACGAC 
GCGGCGCAGC CGGCTGCGCT CGCATCGCCG GGCGCAGCCG CATGA 

 

Protein sequence

MPMRDASRIA PPARPVNHPG IRIMSATQPE WIAVCRLDDI PPLGARVLTR EAGMPIALFR 
TASDAVFALL DRCPHKGGPL SQGIVHGEQV TCPLHGFNVA FSSGCALPPD EGCTSVFSVK 
RDGDTVLLER TELATLGVDD AAQPAALASP GAAA