| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0076 |
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| Symbol | rpoN |
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| ID | 4680089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 76776 |
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| End bp | 78317 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639844354 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_991428 |
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| Protein GI | 121600725 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAACT TCCGGTATGA ATCCCTTTTT GCCATGAAAG CCAGTCTTCA ACTTCGCCTG
TCGCAGCATC TCGCGCTCAC GCCCCAGCTT CAGCAGTCGA TCCGGCTGTT GCAACTGTCG
ACGCTCGAAC TGCAACAGGA AGTCGCGACG GCGATCGCGC AGAACCCGCT GCTCGAGAAC
GACGATGACT GGATCGCGAG CCCGTTGCGC GTCGCGGCCG ACGGCTCGGT GATCGCGCAG
ACGCCCGCGT CGTCCGCGCC CGAGCCGATG GCGGGCGCGC CGAACGGCAC GGCTGCGACC
AATGAGCGCA CCGAGCGCGA CGAAACCGCC GGCGTCGACG AATACGACAG CTATTCGGCC
GACGGCGGCG ACGCGAGCCA GTGGAACCTC GACGACTTCG GCCGCTCGCC CGCCGCGTCC
GACGACGACG ATCTGCCGCC GATGCAGATC CACGAGACGT CGACGTCGCT GCGCGATCAT
CTGATGGCGC AGTTGCGCGT CACGCAGGCG AGCCCGCGCG ATCGCGCGCT CGTCACGTTC
CTGATCGAAT CGCTCGACGA CGACGGCTAC CTGAGCGCGT CGCTCGAGGA AGTGCTCGCC
GATCTGCCGG CGGAGCTCGA GGTCGACGTC GACGAACTGA ACGCGGCGCT CGCGCTCGTG
CACAGCTTCG ATCCGGCGGG CGTCGGCGCG CGCTCCGCGT CCGAATGCCT GAAGCTGCAG
TTGCTGCGCC TGGATCCGTC CCCGACGCGC GCGCTCGCGC TCGATATCGT GTCGCAGCAT
CTGGAGCTGC TCGCCGCGCG CGATTTCACG CGCCTGCGCA AGCAACTGAA GGCGACCGAC
GACGCGCTGC GCGACGCGCA CGCGCTGATC CGCTCGCTCG AGCCGTTCCC CGGCGCGGCG
TACGGCAAGG CCGAAGCCGA TTACGTGGTG CCCGACATCA TCGTGAAGAA GGCCGGCCAA
AACTGGCAGG CGGAACTCAA TCCGGAAGTG GTGCCGAAGC TGCGGATCAA CAATCTTTAC
GCGAACATCC TGCGCAACAG CCGGGGCGAT CCGAGCGCGG GATCGCTGAA GCAACAGCTT
CAGGAAGCGC GCTGGCTGAT CAAGAACATT CAGCAGCGGT TCGAGACGAT CCTGCGCGTC
GCGCAGGCGA TTGTCGAGCG TCAGAAGAAT TTCTTCGCGC ACGGCGAAAT TGCGATGCGC
CCCTTGGTTT TGCGGGAAAT AGCTGATACG CTGGGCCTAC ACGAGTCGAC TGTCTCCCGT
GTGACAACCG GCAAGTACAT GCTGACCCCG TTCGGCACAC TTGAATTTAA GTACTTCTTC
GGATCGCACG TATCGACAGA CACCGGAGGT GCCGCGTCGT CGACAGCGAT CCGCGCCCTC
ATCAAACAAC TGATAGGAGC CGAAGACCCC AAATCCCCTC TTTCGGACAG TCGCATAGCC
GAGCTGCTAG CGGAACAAGG GTTCGTGGTC GCGCGCCGCA CGGTTGCCAA ATATCGCGAA
GCCCTCAAGA TCCCGGCGGT GAATCTGCGC AAGTCTCTGT AG
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| Protein sequence | MANFRYESLF AMKASLQLRL SQHLALTPQL QQSIRLLQLS TLELQQEVAT AIAQNPLLEN
DDDWIASPLR VAADGSVIAQ TPASSAPEPM AGAPNGTAAT NERTERDETA GVDEYDSYSA
DGGDASQWNL DDFGRSPAAS DDDDLPPMQI HETSTSLRDH LMAQLRVTQA SPRDRALVTF
LIESLDDDGY LSASLEEVLA DLPAELEVDV DELNAALALV HSFDPAGVGA RSASECLKLQ
LLRLDPSPTR ALALDIVSQH LELLAARDFT RLRKQLKATD DALRDAHALI RSLEPFPGAA
YGKAEADYVV PDIIVKKAGQ NWQAELNPEV VPKLRINNLY ANILRNSRGD PSAGSLKQQL
QEARWLIKNI QQRFETILRV AQAIVERQKN FFAHGEIAMR PLVLREIADT LGLHESTVSR
VTTGKYMLTP FGTLEFKYFF GSHVSTDTGG AASSTAIRAL IKQLIGAEDP KSPLSDSRIA
ELLAEQGFVV ARRTVAKYRE ALKIPAVNLR KSL
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