Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0004 |
Symbol | |
ID | 4679287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 2595 |
End bp | 3263 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639844282 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_991360 |
Protein GI | 121599445 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.211943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCTC CTAGCCCTCG GCGGGGCACG CGTCTTGGTG AATGTCTGCG GCAAAGTGTA GCGGGGAGGG CCGAGTGGAA ACTTGCGAAC TTGGTCGCGC AACGCTACGC TTGCGCAATT TCTCGTCCGC ACGAACAGGC AGGGAGACAG GAAATGGCGC ACGTGGAATT GGATGCGATT GACCGGCGCA TTCTTTCTAT CCTTCAGGAG AATGGGCGTT TGTCGAACCA GGACATCGCC GAGCGGGTGA ATCTGTCGCC GAGTCCTTGC CTGAGGCGGA TCCGCCGGCT CGAGGAAATG GGCGTGATCA CCGGCTACGT CGCGCTGCTC GATCCGCAGA AGCTCGGGCT CGATCTGCTC GCGTACGTGA GCGTGCGGCT GGAGAAGCGC GGCGGCGTCG CGCCCGTGCG CGGCGACGAG ACGTCCGCGC GCGCCGGCGC GACCCATGCC GAGCTGTTCC GCGCGGCGGT GCAGGCGTGG CCGGAAGTGG TCGCGTGCCA CGCGATGACG GGCGACATGG ATTATCTGCT GCGCGTGCAG GTCGAGGACA TGGCGCATTT CTCGCGCTTC ATGCAGGAGC AACTGCTGCA CCATCCGTCG GTGATCGACG TGAAGACGAG CTTCTCGCTC GAGCGCTTCA AGGAAACGAC CGCGCTGCCG ATCCGCTGA
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Protein sequence | MASPSPRRGT RLGECLRQSV AGRAEWKLAN LVAQRYACAI SRPHEQAGRQ EMAHVELDAI DRRILSILQE NGRLSNQDIA ERVNLSPSPC LRRIRRLEEM GVITGYVALL DPQKLGLDLL AYVSVRLEKR GGVAPVRGDE TSARAGATHA ELFRAAVQAW PEVVACHAMT GDMDYLLRVQ VEDMAHFSRF MQEQLLHHPS VIDVKTSFSL ERFKETTALP IR
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