| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1704 |
|---|
| Symbol | |
|---|
| ID | 4678107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 1671589 |
|---|
| End bp | 1672731 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639844219 |
|---|
| Product | beta-glucosidase |
|---|
| Protein accession | YP_991298 |
|---|
| Protein GI | 121596812 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.324013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCATCCG TCACACGCTT GACGGCGCCC GTTGCCGCGC GCTCGCGCGG CGTTTCGCGT
CGCGCCGAAC GACAGAACCA AGCAAACATT CACGGAGACA AACGCATGCA CGCAAAACGC
CTTTCCATCG CCGTTCTTTC CGCCACGCTG TGCGCGCTCG CGCATGCCGC CGGCAACGAC
GCACCGTCGC CGGACATCGC GTCCCGCGAC GCTTACGCGC TTCGCCGCGC GCACGCGCTG
GTTCGCCAGA TGACGCTCGA CGAGAAGCTT CAACTGATTC ATTCGAAGTA CCCAATGAGC
GACGTGCCGG GCGGCGGCGC GGGCTTCATC CAGGGTATCG CGCGGCTTGG CATTCCCGAT
CTGAACATGG TGGATTCGGC GACGGGCTCG GGCAGCACGT CTCAGCCGAG CACGACGTTT
CCCGCGACGA TCGGGCTCGC GGCGAGCTGG GACAAGCGCC TTTCGTACGC ATTCGGCGCG
GTGATCGCCG ACCAGTTGCG CACGCAAGGA TTCGCGATGA GCCTGGGCGG AGGCACCAAC
CTCACGCGCG AGCCGCGCGG CGGACGCCTG TTCGAGTATC TCGGCGAAGA TCCCGTCCTC
GCCGGCGAAA TGCTCGCGGC GCGCACGCGC GGCACGCAGG ACCGCAAGGT GATCGCGACG
ATCAAGCACT ACGTCGGCAA CGAACAGGAA ACGAACCGGA TGGGCGGCGA CGACCAGATC
GACGAGCGCA CATTGCGCGA GCTCTATCTG CTGCCGTTCG AAATCGCGAT GAAGGCCGCG
CGCCCCGGCA ACGTGATGTG CAGCTACAAC CGCCTTAACG GCGACTATGC ATGCGAGAAC
GCACACGTGC TCACCGACGT GCTCAAGAAC GAATGGCATT TCCAGGGGCA GGTGCAGTCC
GACTGGGGCG CCGCGCATAG CACCGCGAAG GCGATCAACG CGGGGCTCGA CGAAGAGGAA
GACGTCGGGC CGACCGTGTT CCTCACGCCC GCGCTCGTCA AGCAGGCGCT CGCGAATCGC
GAGATCGCGC CGGCGCGCCT CGACGACATG GTCCGGCGCA AGCTCTACGC GATGATCCGC
ACGGGCGTGA TGGACGATCC GCCGCGCGGC GGCGGCACGA TCGATTTCGC CGCGGCCAAT
TGA
|
|---|
| Protein sequence | MSSVTRLTAP VAARSRGVSR RAERQNQANI HGDKRMHAKR LSIAVLSATL CALAHAAGND
APSPDIASRD AYALRRAHAL VRQMTLDEKL QLIHSKYPMS DVPGGGAGFI QGIARLGIPD
LNMVDSATGS GSTSQPSTTF PATIGLAASW DKRLSYAFGA VIADQLRTQG FAMSLGGGTN
LTREPRGGRL FEYLGEDPVL AGEMLAARTR GTQDRKVIAT IKHYVGNEQE TNRMGGDDQI
DERTLRELYL LPFEIAMKAA RPGNVMCSYN RLNGDYACEN AHVLTDVLKN EWHFQGQVQS
DWGAAHSTAK AINAGLDEEE DVGPTVFLTP ALVKQALANR EIAPARLDDM VRRKLYAMIR
TGVMDDPPRG GGTIDFAAAN
|
|---|
| |