Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_1376 |
Symbol | catR |
ID | 4677149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 1360417 |
End bp | 1361304 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639843892 |
Product | cat operon transcriptional activator CatR |
Protein accession | YP_990972 |
Protein GI | 121596852 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.345874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGC GTCAGCTCCG GTATTTCATC GCGGTGGCCG AGGAGATGAA CATCACGCGC GCCGCGCAGC GCCTGCACAT GACGCAGCCG CCGCTCAGCC GCCAGCTTCA ACTGATCGAG GACGAGATCG GCCTGCCGCT GTTCGAGCGC GGCGCGCGGC CGCTGAAGCT GACCGACGCC GGGCGGGTGC TGTACGCGCA GGCGCGGCGC GTGCTCGAAC AGGCCGACGA GCTCGCGCCG CTCACGCGGC GGCTCGCGCA GGCGGCCGAG CGGATCGTGA TCGGCTTCGT GCCGTCGACG CTGTACGGCG CGCTGCCCGA GGTGATCCGC GCGTTTCGCG AGGCCGCGCC GGCCGTCGAG CTTTCGCTGA TCGAAATGTT CACGCTCGAG CAGCTCGGCG CGCTCAAGGG CGGGCGCATC GACATCGGCT TCGGCCGGCT GCGCTTCGAC GACGATCGGC TCGTGCGCGA GGTGCTCGTC GAAGAGCGGC TGATCGCGGC GCTGCCGGAC GGGCATCCGC TCGCCGCGCC CGATGCGTCG ATCTCGCTGG CGGACATCGC CGGGCAGACG TTGATCGTCT ACCCGAGCAC GCCCCGGCCG AGCTTCGCCG ACCAGCAACT GTCCGCGCTG CGCGACGGCG GGCTCGCGCC CGTCGCGGTG CACGAGGTGC GCGAGCTGCA GACGGCGCTC GGGCTCGTCG CCGCGCAGGT CGGCGTATCG CTTGTGCCGG AGAGCGTCGA GGGCGTGAGG GTGAAGGGTG TCGTCTACCG GCGGCTGCCG GAGCCCGTCG CGACCTCGCC GATCATCCTG AGCCGGCGGC TGCACGACGA AAGCCGCGCG ACCGCGCTGT TCTGCTCGCT CGCGCGCGAA CTGATGGCGG GCCACTGA
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Protein sequence | MELRQLRYFI AVAEEMNITR AAQRLHMTQP PLSRQLQLIE DEIGLPLFER GARPLKLTDA GRVLYAQARR VLEQADELAP LTRRLAQAAE RIVIGFVPST LYGALPEVIR AFREAAPAVE LSLIEMFTLE QLGALKGGRI DIGFGRLRFD DDRLVREVLV EERLIAALPD GHPLAAPDAS ISLADIAGQT LIVYPSTPRP SFADQQLSAL RDGGLAPVAV HEVRELQTAL GLVAAQVGVS LVPESVEGVR VKGVVYRRLP EPVATSPIIL SRRLHDESRA TALFCSLARE LMAGH
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